| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is yjjG [C]
Identifier: 17231587
GI number: 17231587
Start: 4933759
End: 4934409
Strand: Direct
Name: yjjG [C]
Synonym: alr4095
Alternate gene names: 17231587
Gene position: 4933759-4934409 (Clockwise)
Preceding gene: 17231586
Following gene: 17231591
Centisome position: 76.92
GC content: 42.09
Gene sequence:
>651_bases ATGGAAAGGCCTAAAGTTATTTTTGTGGATGCTGTGGGGACACTCTTTGGCGTTAAGGGTAGTGTCGGAAAAGTTTATAG TCAAATAGCCCAAGAGTTTGGTGTAGAAGTTGCACCGGATATTGTGGATAAAGCATTTGTTGAAAGTTTTAAAGCATCCC CGCCGCCCATATTCCCTGATGCTGACACTGAAGACATACCACAACGTGAATTTGAGTGGTGGCGTAAAATTGCCCTGAAT ACTTTTGAAAGTGCTGGTGTTCTGCCCCAATTTACCGATTTTTCTAGCTTTTTTGGTGAACTATATATTCACTTTGGCAC TGCTGAACCTTGGGTGATATATCCTGATGTTGTGCAATCCTTGAGCAACTGGCAACATATAGGGATTGAATTGGGCGTTT TGTCTAATTTCGATTCGCGGTTGTACTCAGTTTTGCAAAGTTTAGGTTTGAGTCACTACTTTTCTTCGGTGACGATTTCC ACTCAAGCAGGTGCAGCAAAACCTGACCCCAAAATTTTTGCGATCGCTTTAGAAAAACACAATAGTTCTCCTGAAGAGGC ATGGCACATTGGCGATAGTATTGAAGAAGATTATCAAGGAGCAAAAGCAGCCGGGTTAAGGGGTGTTTGGATTAATCGAG AGAAAGGTTAA
Upstream 100 bases:
>100_bases AAGGGTACTAGGTATTAGGGATTGCACTTCCTTGCTTGAACACTTTCGCGCAGGGAAGTCAATGACCAATGACTAACATT TATAATTTGCAAGCAGTTTA
Downstream 100 bases:
>100_bases AAATATTTATTCTTAGGGAATTAAGACTGTAAAAATAGAACCTTGGGGATGATTATCTTCGATAGTAATCGTGCCATTGT GTGCTTCTATTGCCATTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MERPKVIFVDAVGTLFGVKGSVGKVYSQIAQEFGVEVAPDIVDKAFVESFKASPPPIFPDADTEDIPQREFEWWRKIALN TFESAGVLPQFTDFSSFFGELYIHFGTAEPWVIYPDVVQSLSNWQHIGIELGVLSNFDSRLYSVLQSLGLSHYFSSVTIS TQAGAAKPDPKIFAIALEKHNSSPEEAWHIGDSIEEDYQGAKAAGLRGVWINREKG
Sequences:
>Translated_216_residues MERPKVIFVDAVGTLFGVKGSVGKVYSQIAQEFGVEVAPDIVDKAFVESFKASPPPIFPDADTEDIPQREFEWWRKIALN TFESAGVLPQFTDFSSFFGELYIHFGTAEPWVIYPDVVQSLSNWQHIGIELGVLSNFDSRLYSVLQSLGLSHYFSSVTIS TQAGAAKPDPKIFAIALEKHNSSPEEAWHIGDSIEEDYQGAKAAGLRGVWINREKG >Mature_216_residues MERPKVIFVDAVGTLFGVKGSVGKVYSQIAQEFGVEVAPDIVDKAFVESFKASPPPIFPDADTEDIPQREFEWWRKIALN TFESAGVLPQFTDFSSFFGELYIHFGTAEPWVIYPDVVQSLSNWQHIGIELGVLSNFDSRLYSVLQSLGLSHYFSSVTIS TQAGAAKPDPKIFAIALEKHNSSPEEAWHIGDSIEEDYQGAKAAGLRGVWINREKG
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Homo sapiens, GI13654294, Length=203, Percent_Identity=32.0197044334975, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17553988, Length=211, Percent_Identity=34.1232227488152, Blast_Score=110, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6323778, Length=234, Percent_Identity=27.7777777777778, Blast_Score=93, Evalue=3e-20, Organism=Drosophila melanogaster, GI19923000, Length=214, Percent_Identity=33.1775700934579, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24639695, Length=221, Percent_Identity=28.9592760180996, Blast_Score=89, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR011950 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23960; Mature: 23960
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERPKVIFVDAVGTLFGVKGSVGKVYSQIAQEFGVEVAPDIVDKAFVESFKASPPPIFPD CCCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCC ADTEDIPQREFEWWRKIALNTFESAGVLPQFTDFSSFFGELYIHFGTAEPWVIYPDVVQS CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEECCCCCEEECHHHHHH LSNWQHIGIELGVLSNFDSRLYSVLQSLGLSHYFSSVTISTQAGAAKPDPKIFAIALEKH HCCHHHCCEEEEECCCHHHHHHHHHHHHCHHHHHHHEEEECCCCCCCCCCCEEEEEEECC NSSPEEAWHIGDSIEEDYQGAKAAGLRGVWINREKG CCCHHHHHHCCCHHHHHHCCHHHCCCCEEEEECCCC >Mature Secondary Structure MERPKVIFVDAVGTLFGVKGSVGKVYSQIAQEFGVEVAPDIVDKAFVESFKASPPPIFPD CCCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCC ADTEDIPQREFEWWRKIALNTFESAGVLPQFTDFSSFFGELYIHFGTAEPWVIYPDVVQS CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEECCCCCEEECHHHHHH LSNWQHIGIELGVLSNFDSRLYSVLQSLGLSHYFSSVTISTQAGAAKPDPKIFAIALEKH HCCHHHCCEEEEECCCHHHHHHHHHHHHCHHHHHHHEEEECCCCCCCCCCCEEEEEEECC NSSPEEAWHIGDSIEEDYQGAKAAGLRGVWINREKG CCCHHHHHHCCCHHHHHHCCHHHCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014 [H]