Click here to switch to the map view.

The map label for this gene is 17231486

Identifier: 17231486

GI number: 17231486

Start: 4813016

End: 4813423

Strand: Direct

Name: 17231486

Synonym: alr3994

Alternate gene names: NA

Gene position: 4813016-4813423 (Clockwise)

Preceding gene: 17231485

Following gene: 17231487

Centisome position: 75.04

GC content: 45.1

Gene sequence:

>408_bases
GTGCAATCTAAAAAACCCGAAAAAATCGATTTCAATACGGAATACCCGTGTCCTTGCCGTCGCCGAGGGCGGTTAGTACC
GATTACACTGACAGAGGCATTTGGTTGCGATCGCTGTCAGCAAATCTTTGTTGTAGAAGATAATGGCCATGTATTAGAAC
AGCTTTCAACCACCTATCCCTACAAACGTGCTTGGCGTTGGACAGGGAATAGTTGGCAAGTTGTCCACCCAAAATTGCGA
GAAAGCTATTTACCTATAGCATTGGGCATTATTTTCGTGCTAGTGATTATATGGCTACCATTAGCACTGCGACTGGCCAA
TGGTTCTAGTATCATCGCTTGGGCAATGGTGGCAGTATTGTTGGCTATTTTGCCAGCACTCATGGTCTGGCTTACTTACA
GACGATAA

Upstream 100 bases:

>100_bases
TTAACGTGGTTTTAATACCCACACTCATACAATCCTGATTACTTGTCATGTATGGGGTTCTTAATTTTAAATTTTGAATT
TTAAATTGCTGAAAACGCTT

Downstream 100 bases:

>100_bases
CTCAATGACCGTTGCAGCTTTAGATGATTGTCCCGAACCCATGAAAAGCGCCAAACGCGCTTTTCAAGCTTCCCTGAAGT
TAGGTACTACCAAGGGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MQSKKPEKIDFNTEYPCPCRRRGRLVPITLTEAFGCDRCQQIFVVEDNGHVLEQLSTTYPYKRAWRWTGNSWQVVHPKLR
ESYLPIALGIIFVLVIIWLPLALRLANGSSIIAWAMVAVLLAILPALMVWLTYRR

Sequences:

>Translated_135_residues
MQSKKPEKIDFNTEYPCPCRRRGRLVPITLTEAFGCDRCQQIFVVEDNGHVLEQLSTTYPYKRAWRWTGNSWQVVHPKLR
ESYLPIALGIIFVLVIIWLPLALRLANGSSIIAWAMVAVLLAILPALMVWLTYRR
>Mature_135_residues
MQSKKPEKIDFNTEYPCPCRRRGRLVPITLTEAFGCDRCQQIFVVEDNGHVLEQLSTTYPYKRAWRWTGNSWQVVHPKLR
ESYLPIALGIIFVLVIIWLPLALRLANGSSIIAWAMVAVLLAILPALMVWLTYRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15613; Mature: 15613

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSKKPEKIDFNTEYPCPCRRRGRLVPITLTEAFGCDRCQQIFVVEDNGHVLEQLSTTYP
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHCCC
YKRAWRWTGNSWQVVHPKLRESYLPIALGIIFVLVIIWLPLALRLANGSSIIAWAMVAVL
CHHEEEECCCCEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LAILPALMVWLTYRR
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MQSKKPEKIDFNTEYPCPCRRRGRLVPITLTEAFGCDRCQQIFVVEDNGHVLEQLSTTYP
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHCCC
YKRAWRWTGNSWQVVHPKLRESYLPIALGIIFVLVIIWLPLALRLANGSSIIAWAMVAVL
CHHEEEECCCCEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LAILPALMVWLTYRR
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA