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The map label for this gene is 17231348

Identifier: 17231348

GI number: 17231348

Start: 4653157

End: 4653426

Strand: Reverse

Name: 17231348

Synonym: asl3856

Alternate gene names: NA

Gene position: 4653426-4653157 (Counterclockwise)

Preceding gene: 17231351

Following gene: 17231346

Centisome position: 72.55

GC content: 42.22

Gene sequence:

>270_bases
GTGAATTTTAGTCCTAATGGTGAAATACTTGCTGCTGCTAATTGGGATAGTACAGTCAAATTGTGGAGCCGTGAGGGCAA
ATTAATTAAAACCCTCAACGGACACGAAGCTCCTGTGTTGAGCGTCAGTTTTAGCCCTGATGGACAGACGTTAGCTTCAG
CTAGCGATGACAACACAATTATTTTATGGAACTTACATCTTGATGACCTACTGAATCGTGGTTGTGGCTGGGTCAATAAT
TATCGGAAGCGCAACAACAATTGTAGATGA

Upstream 100 bases:

>100_bases
ATTGGCTTCTGCTGGTTGGGACAACACAGTCAGTTTATGGCGACGAGATGGGACTTTGTTGCAAACCTTGTTAAAAGGCT
TGAGCGACAGCGTTAATGCT

Downstream 100 bases:

>100_bases
GCGCGATCGCTTGCTTTGTGATGATGTCAGCGATCGTATCTAAGAACTAATCTGTAATTAAATTAACTATCCATGCCAAA
ATCGACGAAACACTTAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MNFSPNGEILAAANWDSTVKLWSREGKLIKTLNGHEAPVLSVSFSPDGQTLASASDDNTIILWNLHLDDLLNRGCGWVNN
YRKRNNNCR

Sequences:

>Translated_89_residues
MNFSPNGEILAAANWDSTVKLWSREGKLIKTLNGHEAPVLSVSFSPDGQTLASASDDNTIILWNLHLDDLLNRGCGWVNN
YRKRNNNCR
>Mature_89_residues
MNFSPNGEILAAANWDSTVKLWSREGKLIKTLNGHEAPVLSVSFSPDGQTLASASDDNTIILWNLHLDDLLNRGCGWVNN
YRKRNNNCR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 13 WD repeats [H]

Homologues:

Organism=Homo sapiens, GI7657439, Length=66, Percent_Identity=45.4545454545455, Blast_Score=67, Evalue=4e-12,
Organism=Homo sapiens, GI26665869, Length=73, Percent_Identity=45.2054794520548, Blast_Score=65, Evalue=1e-11,
Organism=Homo sapiens, GI213021186, Length=78, Percent_Identity=47.4358974358974, Blast_Score=64, Evalue=2e-11,
Organism=Homo sapiens, GI5032159, Length=78, Percent_Identity=47.4358974358974, Blast_Score=64, Evalue=2e-11,
Organism=Homo sapiens, GI213021190, Length=78, Percent_Identity=47.4358974358974, Blast_Score=64, Evalue=3e-11,
Organism=Homo sapiens, GI213021188, Length=78, Percent_Identity=47.4358974358974, Blast_Score=64, Evalue=3e-11,
Organism=Homo sapiens, GI19913371, Length=73, Percent_Identity=46.5753424657534, Blast_Score=63, Evalue=5e-11,
Organism=Drosophila melanogaster, GI17137500, Length=73, Percent_Identity=46.5753424657534, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020472
- InterPro:   IPR011600
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00656 Peptidase_C14; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 9956; Mature: 9956

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS00678 WD_REPEATS_1 ; PS50082 WD_REPEATS_2 ; PS50294 WD_REPEATS_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFSPNGEILAAANWDSTVKLWSREGKLIKTLNGHEAPVLSVSFSPDGQTLASASDDNTI
CCCCCCCCEEEEECCCCEEEEECCCCCEEEECCCCCCCEEEEEECCCCCEEECCCCCCEE
ILWNLHLDDLLNRGCGWVNNYRKRNNNCR
EEEECCHHHHHHCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MNFSPNGEILAAANWDSTVKLWSREGKLIKTLNGHEAPVLSVSFSPDGQTLASASDDNTI
CCCCCCCCEEEEECCCCEEEEECCCCCEEEECCCCCCCEEEEEECCCCCEEECCCCCCEE
ILWNLHLDDLLNRGCGWVNNYRKRNNNCR
EEEECCHHHHHHCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]