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The map label for this gene is psbO

Identifier: 17231346

GI number: 17231346

Start: 4651315

End: 4652136

Strand: Reverse

Name: psbO

Synonym: all3854

Alternate gene names: 17231346

Gene position: 4652136-4651315 (Counterclockwise)

Preceding gene: 17231348

Following gene: 17231345

Centisome position: 72.53

GC content: 43.8

Gene sequence:

>822_bases
ATGAGGTATCGCGCTTTAATTGTTGCATTCTTGGCTGTGTGCTTGGGGCTACTCACTGCTTGTAGTGACGCTCCAGCTTC
TAGTACTAGAGATATACTGACTTACGAACAAATTCGAGGCACTGGCCTGGCTAACAAATGTCCCCAACTGACAGAAACCA
GCCGTGGCTCCATTCCCTTGGATTCCAGTAAGTCCTATGTCCTCAAAGAACTTTGCTTGGAACCAACCAATTTCTTCGTC
AAAGAAGAACCTGCTAATAAACGCCAAACAGCAGAATTTGTGGCTGGAAAATTGTTAACTAGATACACTTCCACCATTGA
TCAGGTATCGGGTGATCTTAAGTTCAACGATGATAGCAGCTTGACCTTTGTGGAAAAAGATGGTCTTGACTTCCAAGCCA
TTACTGTGCAATTACCTGGTGGTGAGCGAGTACCCTTCCTGTTCACCATTAAAAATTTAGTTGCACAAACACAACCTGGC
TTAAGCAGTCTGAATACTTCCACAGACTTTGAAGGTACATTCAAAGTACCTTCCTATCGTGGTGCTGCATTCTTAGATCC
TAAAGGTCGGGGTGTTGTTAGTGGCTATGATAATGCCGTTGCTCTTCCAGCCCAAGCCGATGATGAAGACCTTACTCGTA
CTAACGTTAAGCGTGCGGAAATTCTCAACGGCAAAATTTCTCTACAAATAGCTAAAGTTGATAGCTCTAGTGGTGAAATT
GCTGGTACTTTTGAGAGCGAACAGCCTTCAGATACTGATTTAGGCGCTGATGAACCCAAGGAAGTGAAGATTCGGGGTAT
ATTTTACGCTCGTGTTGAATAA

Upstream 100 bases:

>100_bases
CGCGTTATTTGAGGTAAGTAGTGATGCCAATTTGCCGCAAAATGTACTTATCACTATGCCCAAACCCTTTATATATCGAT
TTTTGACATTGAGGTTGATC

Downstream 100 bases:

>100_bases
ACCCAAACGTGCCTAAATTTTCTTGATTGCCAAAGCTGTCTGGCACTGGAACCATTCTTTGCCTATTATCAAATTTCTGA
TTGAACGTTAACCCATACCC

Product: manganese-stabilzing protein precursor

Products: NA

Alternate protein names: MSP

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MRYRALIVAFLAVCLGLLTACSDAPASSTRDILTYEQIRGTGLANKCPQLTETSRGSIPLDSSKSYVLKELCLEPTNFFV
KEEPANKRQTAEFVAGKLLTRYTSTIDQVSGDLKFNDDSSLTFVEKDGLDFQAITVQLPGGERVPFLFTIKNLVAQTQPG
LSSLNTSTDFEGTFKVPSYRGAAFLDPKGRGVVSGYDNAVALPAQADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEI
AGTFESEQPSDTDLGADEPKEVKIRGIFYARVE

Sequences:

>Translated_273_residues
MRYRALIVAFLAVCLGLLTACSDAPASSTRDILTYEQIRGTGLANKCPQLTETSRGSIPLDSSKSYVLKELCLEPTNFFV
KEEPANKRQTAEFVAGKLLTRYTSTIDQVSGDLKFNDDSSLTFVEKDGLDFQAITVQLPGGERVPFLFTIKNLVAQTQPG
LSSLNTSTDFEGTFKVPSYRGAAFLDPKGRGVVSGYDNAVALPAQADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEI
AGTFESEQPSDTDLGADEPKEVKIRGIFYARVE
>Mature_273_residues
MRYRALIVAFLAVCLGLLTACSDAPASSTRDILTYEQIRGTGLANKCPQLTETSRGSIPLDSSKSYVLKELCLEPTNFFV
KEEPANKRQTAEFVAGKLLTRYTSTIDQVSGDLKFNDDSSLTFVEKDGLDFQAITVQLPGGERVPFLFTIKNLVAQTQPG
LSSLNTSTDFEGTFKVPSYRGAAFLDPKGRGVVSGYDNAVALPAQADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEI
AGTFESEQPSDTDLGADEPKEVKIRGIFYARVE

Specific function: MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBO_NOSS1 (P13907)

Other databases:

- EMBL:   X15554
- EMBL:   BA000019
- PIR:   AG2287
- PIR:   S06736
- RefSeq:   NP_487894.1
- ProteinModelPortal:   P13907
- SMR:   P13907
- STRING:   P13907
- GeneID:   1107452
- GenomeReviews:   BA000019_GR
- KEGG:   ana:all3854
- NMPDR:   fig|103690.1.peg.4161
- eggNOG:   NOG05777
- HOGENOM:   HBG317982
- OMA:   GKANDCP
- ProtClustDB:   CLSK893286
- BioCyc:   NSP103690:ALL3854-MONOMER
- GO:   GO:0015979
- InterPro:   IPR002628

Pfam domain/function: PF01716 MSP

EC number: NA

Molecular weight: Translated: 29639; Mature: 29639

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYRALIVAFLAVCLGLLTACSDAPASSTRDILTYEQIRGTGLANKCPQLTETSRGSIPL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
DSSKSYVLKELCLEPTNFFVKEEPANKRQTAEFVAGKLLTRYTSTIDQVSGDLKFNDDSS
CCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC
LTFVEKDGLDFQAITVQLPGGERVPFLFTIKNLVAQTQPGLSSLNTSTDFEGTFKVPSYR
EEEEECCCCCEEEEEEECCCCCCCCCEEEHHHHHHHCCCCHHHCCCCCCCCEEEECCCCC
GAAFLDPKGRGVVSGYDNAVALPAQADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEI
CCEEECCCCCEEECCCCCEEEECCCCCCCHHHHHCCHHHHEECCEEEEEEEEECCCCCCE
AGTFESEQPSDTDLGADEPKEVKIRGIFYARVE
EEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEC
>Mature Secondary Structure
MRYRALIVAFLAVCLGLLTACSDAPASSTRDILTYEQIRGTGLANKCPQLTETSRGSIPL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
DSSKSYVLKELCLEPTNFFVKEEPANKRQTAEFVAGKLLTRYTSTIDQVSGDLKFNDDSS
CCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC
LTFVEKDGLDFQAITVQLPGGERVPFLFTIKNLVAQTQPGLSSLNTSTDFEGTFKVPSYR
EEEEECCCCCEEEEEEECCCCCCCCCEEEHHHHHHHCCCCHHHCCCCCCCCEEEECCCCC
GAAFLDPKGRGVVSGYDNAVALPAQADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEI
CCEEECCCCCEEECCCCCEEEECCCCCCCHHHHHCCHHHHEECCEEEEEEEEECCCCCCE
AGTFESEQPSDTDLGADEPKEVKIRGIFYARVE
EEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2518833; 11759840