| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is hemH [H]
Identifier: 17231243
GI number: 17231243
Start: 4528364
End: 4529530
Strand: Direct
Name: hemH [H]
Synonym: alr3751
Alternate gene names: 17231243
Gene position: 4528364-4529530 (Clockwise)
Preceding gene: 17231241
Following gene: 17231244
Centisome position: 70.6
GC content: 45.59
Gene sequence:
>1167_bases ATGGGTCGTGTAGGCGTATTATTACTCAATCTCGGTGGTCCCGATAAGCTGGAGGATGTAGCTCCGTTTCTATTTAACCT ATTCTCCGATCCGGAAATTATACGCTTACCATTCCGGTGGTTGCAGAAACCCTTGGCTTGGTTTATTGCTTCTCGACGCA CCAAAACCTCCCAAGAGAACTATAAGCAAATTGGCGGTGGCTCCCCACTACGGAGGATTACGGAAGCCCAAGGAGAAGCC TTAAAGGAACAGTTGCATTATTTGGGTCAAGAAGCGAATATTTATGTGGGAATGCGTTATTGGCACCCATATACGGAAGA GGCGATCGCTCTTTTGACCCAAGATAACCTTGATAACTTGGTGATTTTGCCACTATACCCCCAATTCTCTATCAGCACTA GTGGCTCTAGCTTCCGTCTACTAGAAAGACTTTGGCAAGAAGATCCCAAACTACAACGTCTGGAATACACAGTCATTCCT TCTTGGTATAAAGAACCAGGTTATTTACAGGCGATGGCGGAACTCATCCGCCAAGAAATAGAGCAATTTCCTCATCCTGA TCAGGTTCATGTGTTCTTCAGCGCTCATGGTGTACCCAAAAGCTATGTTGAAGAAGCAGGCGACCCCTATCAGCAGGAGA TTGAGGAATGTACTGCATTAATTATGCAGACTCTCAATCGACCAAACCCTCACACTTTAGCGTACCAAAGTCGCGTCGGC CCGGTTGAATGGCTACAACCCTATACTGAAGATGCACTCAAAGAACTAGGCGCGCAAGGTGTCAAAGATTTAGTTGTTGT ACCTATCAGTTTCGTCTCCGAACACATCGAGACACTACAGGAAATTGATATCGAGTATCGGGAAATAGCAGAAGAAGCCG GAATCCACAATTTCCGTCGTGTCCCTGCACCTAATACCCATCCAGTATTTATTAGAGCTTTGGCTGATTTGGTAATTGAT GCGCTCAACAAACCCAGTTTCAAGCTTTCGCAAGCCGCCCAAATCAAGAAAATGGTCAAAATGTATCCTCCTGAGAGTTG GGAATGGGGTATGACTTCTAGTGCGGAAGTTTGGAATGGACGGATTGCAATGCTAGGTTTCATTGCTCTAATTATCGAGT TGGTTACAGGCCAAGGTCTACTGCACATGATTGGGCTTTTGCAGTAG
Upstream 100 bases:
>100_bases TTGCCATTGTACTATTCCTAACTGTTAAGCTTTATATTTAATAAAGATATATTGTTAACATTAGTAAAAAATCTGAAAAG GTTGGGGGAAAATAACTGCT
Downstream 100 bases:
>100_bases TGAGAGAAAAGCGATGATATCCGCTAAAAGAGCGTCGCTGTAACATTTCTATCACAAAAAAATATTAATTGGAGTGATAA ATCGGGCATTGAATTTTGAT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MGRVGVLLLNLGGPDKLEDVAPFLFNLFSDPEIIRLPFRWLQKPLAWFIASRRTKTSQENYKQIGGGSPLRRITEAQGEA LKEQLHYLGQEANIYVGMRYWHPYTEEAIALLTQDNLDNLVILPLYPQFSISTSGSSFRLLERLWQEDPKLQRLEYTVIP SWYKEPGYLQAMAELIRQEIEQFPHPDQVHVFFSAHGVPKSYVEEAGDPYQQEIEECTALIMQTLNRPNPHTLAYQSRVG PVEWLQPYTEDALKELGAQGVKDLVVVPISFVSEHIETLQEIDIEYREIAEEAGIHNFRRVPAPNTHPVFIRALADLVID ALNKPSFKLSQAAQIKKMVKMYPPESWEWGMTSSAEVWNGRIAMLGFIALIIELVTGQGLLHMIGLLQ
Sequences:
>Translated_388_residues MGRVGVLLLNLGGPDKLEDVAPFLFNLFSDPEIIRLPFRWLQKPLAWFIASRRTKTSQENYKQIGGGSPLRRITEAQGEA LKEQLHYLGQEANIYVGMRYWHPYTEEAIALLTQDNLDNLVILPLYPQFSISTSGSSFRLLERLWQEDPKLQRLEYTVIP SWYKEPGYLQAMAELIRQEIEQFPHPDQVHVFFSAHGVPKSYVEEAGDPYQQEIEECTALIMQTLNRPNPHTLAYQSRVG PVEWLQPYTEDALKELGAQGVKDLVVVPISFVSEHIETLQEIDIEYREIAEEAGIHNFRRVPAPNTHPVFIRALADLVID ALNKPSFKLSQAAQIKKMVKMYPPESWEWGMTSSAEVWNGRIAMLGFIALIIELVTGQGLLHMIGLLQ >Mature_387_residues GRVGVLLLNLGGPDKLEDVAPFLFNLFSDPEIIRLPFRWLQKPLAWFIASRRTKTSQENYKQIGGGSPLRRITEAQGEAL KEQLHYLGQEANIYVGMRYWHPYTEEAIALLTQDNLDNLVILPLYPQFSISTSGSSFRLLERLWQEDPKLQRLEYTVIPS WYKEPGYLQAMAELIRQEIEQFPHPDQVHVFFSAHGVPKSYVEEAGDPYQQEIEECTALIMQTLNRPNPHTLAYQSRVGP VEWLQPYTEDALKELGAQGVKDLVVVPISFVSEHIETLQEIDIEYREIAEEAGIHNFRRVPAPNTHPVFIRALADLVIDA LNKPSFKLSQAAQIKKMVKMYPPESWEWGMTSSAEVWNGRIAMLGFIALIIELVTGQGLLHMIGLLQ
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=322, Percent_Identity=41.6149068322981, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI60499025, Length=322, Percent_Identity=41.6149068322981, Blast_Score=236, Evalue=4e-62, Organism=Escherichia coli, GI1786681, Length=322, Percent_Identity=32.9192546583851, Blast_Score=134, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6324750, Length=320, Percent_Identity=36.5625, Blast_Score=196, Evalue=7e-51, Organism=Drosophila melanogaster, GI17864156, Length=326, Percent_Identity=40.1840490797546, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24651774, Length=257, Percent_Identity=36.9649805447471, Blast_Score=175, Evalue=4e-44, Organism=Drosophila melanogaster, GI45552018, Length=172, Percent_Identity=43.0232558139535, Blast_Score=147, Evalue=8e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 44305; Mature: 44174
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRVGVLLLNLGGPDKLEDVAPFLFNLFSDPEIIRLPFRWLQKPLAWFIASRRTKTSQEN CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCCCHHHH YKQIGGGSPLRRITEAQGEALKEQLHYLGQEANIYVGMRYWHPYTEEAIALLTQDNLDNL HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCE VILPLYPQFSISTSGSSFRLLERLWQEDPKLQRLEYTVIPSWYKEPGYLQAMAELIRQEI EEEECCCCEEECCCCCHHHHHHHHHHCCCCHHHEEEEECCHHHCCCCHHHHHHHHHHHHH EQFPHPDQVHVFFSAHGVPKSYVEEAGDPYQQEIEECTALIMQTLNRPNPHTLAYQSRVG HHCCCCCEEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC PVEWLQPYTEDALKELGAQGVKDLVVVPISFVSEHIETLQEIDIEYREIAEEAGIHNFRR CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC VPAPNTHPVFIRALADLVIDALNKPSFKLSQAAQIKKMVKMYPPESWEWGMTSSAEVWNG CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCC RIAMLGFIALIIELVTGQGLLHMIGLLQ HHHHHHHHHHHHHHHHCCCHHHHHHHCC >Mature Secondary Structure GRVGVLLLNLGGPDKLEDVAPFLFNLFSDPEIIRLPFRWLQKPLAWFIASRRTKTSQEN CCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCCCHHHH YKQIGGGSPLRRITEAQGEALKEQLHYLGQEANIYVGMRYWHPYTEEAIALLTQDNLDNL HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCE VILPLYPQFSISTSGSSFRLLERLWQEDPKLQRLEYTVIPSWYKEPGYLQAMAELIRQEI EEEECCCCEEECCCCCHHHHHHHHHHCCCCHHHEEEEECCHHHCCCCHHHHHHHHHHHHH EQFPHPDQVHVFFSAHGVPKSYVEEAGDPYQQEIEECTALIMQTLNRPNPHTLAYQSRVG HHCCCCCEEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC PVEWLQPYTEDALKELGAQGVKDLVVVPISFVSEHIETLQEIDIEYREIAEEAGIHNFRR CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC VPAPNTHPVFIRALADLVIDALNKPSFKLSQAAQIKKMVKMYPPESWEWGMTSSAEVWNG CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCC RIAMLGFIALIIELVTGQGLLHMIGLLQ HHHHHHHHHHHHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA