| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231244
Identifier: 17231244
GI number: 17231244
Start: 4529803
End: 4530354
Strand: Direct
Name: 17231244
Synonym: alr3752
Alternate gene names: NA
Gene position: 4529803-4530354 (Clockwise)
Preceding gene: 17231243
Following gene: 17231246
Centisome position: 70.63
GC content: 40.94
Gene sequence:
>552_bases ATGAAACAATTATTTTGGTTATCCACATTAGGCTTGGCGATCGCTGCAACTACTCTACCCGTTGTAGCTCAAACACCCGT AAATCCAATACCCGACACCCAAACCCCAGGGACTCAAATTCCCAACACTCAAACCCCAGGAACTCAAATTCCACAAACTA CACCAATAACTCAAGATAGTTTTGGCGCACCTCGAATTAAACATACAAGTACATCTCGTACTACTAATTACATCAGTCTC TACACAGGTAGTCAACCTCTAGCCTACGTGACGGTTTTACCGCAAGAAAATATCAGTATTGGTGACAATATTACAGTTAC AGATCAATCTGGTCAAAGCATCAATGCCAACGTTACCAGAGAAGGAGAGAAAATGAGAATTAGCTTTGCTCAACCAGTAG CGCCAGGAAGCACTCTAGAAATTGTTCTCACAGATTTGGCATTTGGTTATCCGTATCCCTCCAAGAGTACTTTTAATTAT GAATTAGCTGGTGGACATATTGGCTTCAACCGAGAGATTCCTTATGGTTTAGCTCAGTTTCAAGTATATTAA
Upstream 100 bases:
>100_bases ATCAACTAAATATCTCATTAGTGGGACGTATTGGCTACTGATATTTTTTAAAGTGAGTTTGATTTGATTAATAAATTACG TTAGTTACAGGAAACTCACC
Downstream 100 bases:
>100_bases CTCCATTTGTTAATTCAATGTCTCAAGAAAATTAGGAAGTGTTGGGTTGGAAGTCTTAATTTTCAACTCAACACTTAATT ATTAATAACTATCGACCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKQLFWLSTLGLAIAATTLPVVAQTPVNPIPDTQTPGTQIPNTQTPGTQIPQTTPITQDSFGAPRIKHTSTSRTTNYISL YTGSQPLAYVTVLPQENISIGDNITVTDQSGQSINANVTREGEKMRISFAQPVAPGSTLEIVLTDLAFGYPYPSKSTFNY ELAGGHIGFNREIPYGLAQFQVY
Sequences:
>Translated_183_residues MKQLFWLSTLGLAIAATTLPVVAQTPVNPIPDTQTPGTQIPNTQTPGTQIPQTTPITQDSFGAPRIKHTSTSRTTNYISL YTGSQPLAYVTVLPQENISIGDNITVTDQSGQSINANVTREGEKMRISFAQPVAPGSTLEIVLTDLAFGYPYPSKSTFNY ELAGGHIGFNREIPYGLAQFQVY >Mature_183_residues MKQLFWLSTLGLAIAATTLPVVAQTPVNPIPDTQTPGTQIPNTQTPGTQIPQTTPITQDSFGAPRIKHTSTSRTTNYISL YTGSQPLAYVTVLPQENISIGDNITVTDQSGQSINANVTREGEKMRISFAQPVAPGSTLEIVLTDLAFGYPYPSKSTFNY ELAGGHIGFNREIPYGLAQFQVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19792; Mature: 19792
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLFWLSTLGLAIAATTLPVVAQTPVNPIPDTQTPGTQIPNTQTPGTQIPQTTPITQDS CCCEEEHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FGAPRIKHTSTSRTTNYISLYTGSQPLAYVTVLPQENISIGDNITVTDQSGQSINANVTR CCCCEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCEEEECCCCCEEECEEEE EGEKMRISFAQPVAPGSTLEIVLTDLAFGYPYPSKSTFNYELAGGHIGFNREIPYGLAQF CCCEEEEEECCCCCCCCEEEEEEEEHHHCCCCCCCCEEEEEECCCEECCCCCCCCCEEEE QVY EEC >Mature Secondary Structure MKQLFWLSTLGLAIAATTLPVVAQTPVNPIPDTQTPGTQIPNTQTPGTQIPQTTPITQDS CCCEEEHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FGAPRIKHTSTSRTTNYISLYTGSQPLAYVTVLPQENISIGDNITVTDQSGQSINANVTR CCCCEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCEEEECCCCCEEECEEEE EGEKMRISFAQPVAPGSTLEIVLTDLAFGYPYPSKSTFNYELAGGHIGFNREIPYGLAQF CCCEEEEEECCCCCCCCEEEEEEEEHHHCCCCCCCCEEEEEECCCEECCCCCCCCCEEEE QVY EEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA