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The map label for this gene is 17231195

Identifier: 17231195

GI number: 17231195

Start: 4471875

End: 4472684

Strand: Direct

Name: 17231195

Synonym: alr3703

Alternate gene names: NA

Gene position: 4471875-4472684 (Clockwise)

Preceding gene: 17231193

Following gene: 17231197

Centisome position: 69.72

GC content: 43.58

Gene sequence:

>810_bases
GTGGGAGTACCGATAAGTATAGTATCTTTTCTCCGACAAACTGACTTATCTGGACAAATCTGGATTGCTCCTGCGATCGC
ATACTTGGCTATTCTACTAGGCGCGTTCTTTGCTTGGCTAGGAATCAAAGGACAGACATACTTCGGTAATACAAAACCTG
AAAAACCCACCCAGGGAAGCTTGTTGCTAGCAGCCATGATAGGTAATACAGGTTACTTAGGCTTTCCCATTACCTTGGCA
ATGGTAGGCAAAGAATACTTTGCTTGGGCATTATTTTACGATTTGCTGGGGTCTTTTCCTGGTGCTTATGCGTTGGGCGT
AGCATTAGGCGCTCATTTCGGCACTAACTTACAAAATCACAGCCAACTTACGCAAGTCATAAGAGCGATTTTCGTTAATC
CGGCTCTATGGAGTTTCGGATTTGGCTTACTATTTCGCCAAATAGCAATTCCTGAGATTTGGGAATATGGCTTAGATAAA
TTTGCCTGGAGTATGGTGGCTTTATCTCTAGTATTAATTGGAATGCGCTTAAGCAAACTAAATTCCTTAGATAACCTACC
ACAGGTAGGCATCAGCTTAGGAATCAAAATGCTCATAGTTCCCCTCATTTTAAGCTGCACCTTACCGTTTTTTGGATTAA
CCGGGCCAGCTGCCAAAGTTATTATCCTGCAAACGGCCATGCCCCCAGCCTTTGCCTGTCTAGTCATCGCCGAAACCTTC
AATTTAGACCACAACCTCGCAGTCACAACAATAGCTATAGGATCTGTGTTACTACTCTTAACACTCCCCATGTGGCTATG
GTTGTTTTGA

Upstream 100 bases:

>100_bases
ACTATACGTCAAACTTGTCAGCTTAGTCTTAGTAGGTTTTATTCTGGGACGCAAGCTACCTAGTACAGTTCCTACCCGTC
TGGGTCAGTTTCTTTTCTGT

Downstream 100 bases:

>100_bases
ATTAGTCAGTTGTTAATTGTTAGTTGTCAACAATCAACAGATATCTTCTCCCCCCATACCCTGCTCACCTTCCCCATCAA
CAATACTGACCTAACTTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MGVPISIVSFLRQTDLSGQIWIAPAIAYLAILLGAFFAWLGIKGQTYFGNTKPEKPTQGSLLLAAMIGNTGYLGFPITLA
MVGKEYFAWALFYDLLGSFPGAYALGVALGAHFGTNLQNHSQLTQVIRAIFVNPALWSFGFGLLFRQIAIPEIWEYGLDK
FAWSMVALSLVLIGMRLSKLNSLDNLPQVGISLGIKMLIVPLILSCTLPFFGLTGPAAKVIILQTAMPPAFACLVIAETF
NLDHNLAVTTIAIGSVLLLLTLPMWLWLF

Sequences:

>Translated_269_residues
MGVPISIVSFLRQTDLSGQIWIAPAIAYLAILLGAFFAWLGIKGQTYFGNTKPEKPTQGSLLLAAMIGNTGYLGFPITLA
MVGKEYFAWALFYDLLGSFPGAYALGVALGAHFGTNLQNHSQLTQVIRAIFVNPALWSFGFGLLFRQIAIPEIWEYGLDK
FAWSMVALSLVLIGMRLSKLNSLDNLPQVGISLGIKMLIVPLILSCTLPFFGLTGPAAKVIILQTAMPPAFACLVIAETF
NLDHNLAVTTIAIGSVLLLLTLPMWLWLF
>Mature_268_residues
GVPISIVSFLRQTDLSGQIWIAPAIAYLAILLGAFFAWLGIKGQTYFGNTKPEKPTQGSLLLAAMIGNTGYLGFPITLAM
VGKEYFAWALFYDLLGSFPGAYALGVALGAHFGTNLQNHSQLTQVIRAIFVNPALWSFGFGLLFRQIAIPEIWEYGLDKF
AWSMVALSLVLIGMRLSKLNSLDNLPQVGISLGIKMLIVPLILSCTLPFFGLTGPAAKVIILQTAMPPAFACLVIAETFN
LDHNLAVTTIAIGSVLLLLTLPMWLWLF

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 29211; Mature: 29080

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVPISIVSFLRQTDLSGQIWIAPAIAYLAILLGAFFAWLGIKGQTYFGNTKPEKPTQGS
CCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCC
LLLAAMIGNTGYLGFPITLAMVGKEYFAWALFYDLLGSFPGAYALGVALGAHFGTNLQNH
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCH
SQLTQVIRAIFVNPALWSFGFGLLFRQIAIPEIWEYGLDKFAWSMVALSLVLIGMRLSKL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSLDNLPQVGISLGIKMLIVPLILSCTLPFFGLTGPAAKVIILQTAMPPAFACLVIAETF
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHEEEEEECCCCHHHHHHHHHHHH
NLDHNLAVTTIAIGSVLLLLTLPMWLWLF
CCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GVPISIVSFLRQTDLSGQIWIAPAIAYLAILLGAFFAWLGIKGQTYFGNTKPEKPTQGS
CCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCC
LLLAAMIGNTGYLGFPITLAMVGKEYFAWALFYDLLGSFPGAYALGVALGAHFGTNLQNH
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCH
SQLTQVIRAIFVNPALWSFGFGLLFRQIAIPEIWEYGLDKFAWSMVALSLVLIGMRLSKL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSLDNLPQVGISLGIKMLIVPLILSCTLPFFGLTGPAAKVIILQTAMPPAFACLVIAETF
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHEEEEEECCCCHHHHHHHHHHHH
NLDHNLAVTTIAIGSVLLLLTLPMWLWLF
CCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]