| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231121
Identifier: 17231121
GI number: 17231121
Start: 4378917
End: 4379747
Strand: Reverse
Name: 17231121
Synonym: all3629
Alternate gene names: NA
Gene position: 4379747-4378917 (Counterclockwise)
Preceding gene: 17231122
Following gene: 17231120
Centisome position: 68.29
GC content: 42.36
Gene sequence:
>831_bases ATGACAGATGCCAAAGCGATCGCTCAACAGTTAGGTGGGGTGAAACCGGATGAAGAATGGTTGCAAGCTGAAATTGCTCG TCTCAAGGGTAAGAGTATTGTTCCATTACAGCAAGTGAGGTCTTTGCATGATTGGTTGGATGGAAAACGTAAAGCACGAC AATTTTGCCGAGTAGTTGGAGAATCACGCACGGGGAAAACAGTTGCTTGTGATGCGTACAGATACAGACAAAAAGTACAG GCGGAGGTGGGACGACCACCAATTGTCCCTGTGGTTTATATTCAGCCACCCCAAAAATGCGGTGCTAAGGATTTGTTTCA AGAAATTATTGAGTATCTAAAATTTAAAGCAACTAAGGGAACAGTATCAGATTTTCGTGGCAGAACAATGGAGGTTTTAA AAGGCTGTGGCGTAGAAATGATTATTGTTGATGAAGCTGACCGCCTCAAGCCTGAGACTTTTGCAGAGGTGCGTGATATT TATGACAAGTTGGGCATTGCTGTTGTTTTAGTAGGAACTGATCGATTAGAAGCAGTAATTAAGCGAGATGAACAAGTTTA TAACCGCTTTCGGGCTTGTCATCGTTTTGGAAAGTTGTCAGGGAAAGATTTCCAGGATACTGTACAAGCCTGGGAGGATA AGATTTTAAAGTTACCATTGCCTTCTAATCTCATTAGCAAGGATATGCTGCGGATTTTAACTTCGGCAACAGAAGGTTAC ATTGGTCGGTTAGATGAAATTCTCAGGGAAGCAGCAATTCGTTCTCTATCAAGGGGATTAAAGAAAATTGACAAGCCTGT TTTACAGGAAGTGGCGCAGGAGTATAAGTGA
Upstream 100 bases:
>100_bases AGCAGAAGAAGTGGAATCTACTACTGAGGTTCAATCTTCATCCTCAGAACTAGAGGTTTGGGACTATGAACAACTGCGTG AAGAATACGGATTTTAAACA
Downstream 100 bases:
>100_bases TGGCAGCACCAGATGTTAAGCCTTGGCTTTTTATTATCCAACCTTATGAAGGGGAAAGCTTGAGCCATTTTCTAGGTCGA TTTAGACGTGCTAACCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase Transposase
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTDAKAIAQQLGGVKPDEEWLQAEIARLKGKSIVPLQQVRSLHDWLDGKRKARQFCRVVGESRTGKTVACDAYRYRQKVQ AEVGRPPIVPVVYIQPPQKCGAKDLFQEIIEYLKFKATKGTVSDFRGRTMEVLKGCGVEMIIVDEADRLKPETFAEVRDI YDKLGIAVVLVGTDRLEAVIKRDEQVYNRFRACHRFGKLSGKDFQDTVQAWEDKILKLPLPSNLISKDMLRILTSATEGY IGRLDEILREAAIRSLSRGLKKIDKPVLQEVAQEYK
Sequences:
>Translated_276_residues MTDAKAIAQQLGGVKPDEEWLQAEIARLKGKSIVPLQQVRSLHDWLDGKRKARQFCRVVGESRTGKTVACDAYRYRQKVQ AEVGRPPIVPVVYIQPPQKCGAKDLFQEIIEYLKFKATKGTVSDFRGRTMEVLKGCGVEMIIVDEADRLKPETFAEVRDI YDKLGIAVVLVGTDRLEAVIKRDEQVYNRFRACHRFGKLSGKDFQDTVQAWEDKILKLPLPSNLISKDMLRILTSATEGY IGRLDEILREAAIRSLSRGLKKIDKPVLQEVAQEYK >Mature_275_residues TDAKAIAQQLGGVKPDEEWLQAEIARLKGKSIVPLQQVRSLHDWLDGKRKARQFCRVVGESRTGKTVACDAYRYRQKVQA EVGRPPIVPVVYIQPPQKCGAKDLFQEIIEYLKFKATKGTVSDFRGRTMEVLKGCGVEMIIVDEADRLKPETFAEVRDIY DKLGIAVVLVGTDRLEAVIKRDEQVYNRFRACHRFGKLSGKDFQDTVQAWEDKILKLPLPSNLISKDMLRILTSATEGYI GRLDEILREAAIRSLSRGLKKIDKPVLQEVAQEYK
Specific function: Unknown
COG id: COG2842
COG function: function code R; Uncharacterized ATPase, putative transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31333; Mature: 31202
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAKAIAQQLGGVKPDEEWLQAEIARLKGKSIVPLQQVRSLHDWLDGKRKARQFCRVVG CCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHC ESRTGKTVACDAYRYRQKVQAEVGRPPIVPVVYIQPPQKCGAKDLFQEIIEYLKFKATKG CCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHCCCC TVSDFRGRTMEVLKGCGVEMIIVDEADRLKPETFAEVRDIYDKLGIAVVLVGTDRLEAVI CHHHHCCHHHHHHHCCCCEEEEECCCHHCCHHHHHHHHHHHHHHCEEEEEECCHHHHHHH KRDEQVYNRFRACHRFGKLSGKDFQDTVQAWEDKILKLPLPSNLISKDMLRILTSATEGY HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHH IGRLDEILREAAIRSLSRGLKKIDKPVLQEVAQEYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDAKAIAQQLGGVKPDEEWLQAEIARLKGKSIVPLQQVRSLHDWLDGKRKARQFCRVVG CCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHC ESRTGKTVACDAYRYRQKVQAEVGRPPIVPVVYIQPPQKCGAKDLFQEIIEYLKFKATKG CCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHCCCC TVSDFRGRTMEVLKGCGVEMIIVDEADRLKPETFAEVRDIYDKLGIAVVLVGTDRLEAVI CHHHHCCHHHHHHHCCCCEEEEECCCHHCCHHHHHHHHHHHHHHCEEEEEECCHHHHHHH KRDEQVYNRFRACHRFGKLSGKDFQDTVQAWEDKILKLPLPSNLISKDMLRILTSATEGY HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHH IGRLDEILREAAIRSLSRGLKKIDKPVLQEVAQEYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA