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The map label for this gene is 17231122

Identifier: 17231122

GI number: 17231122

Start: 4379751

End: 4381364

Strand: Reverse

Name: 17231122

Synonym: all3630

Alternate gene names: NA

Gene position: 4381364-4379751 (Counterclockwise)

Preceding gene: 17231123

Following gene: 17231121

Centisome position: 68.31

GC content: 44.24

Gene sequence:

>1614_bases
GTGATCCAAACTTTACTTGAGCCTTGCGATCGCACAACTTATGGGCAGAAGTTGAAGGAGGCTGCGGACACACTGGGTGT
GACAGTGCGAACGGTGCAGCGTTTGGTGAAAAAATGGGAAGAGGATGGCTTAGTTGGATTCATTCAGACAGGTAGGGCGG
ATAAAGGAAAACATCGAATTGGTGAGTTTTGGGAAAACTTCATCATCAAAACTTACAAGGAAGGTAATAAGGGTAGTAAA
CGCATGACACCCAAACAAGTTGCCTTGAGGGTTCAAGCTAAAGCGCGTGAACTAGGCGATTCCAAGCCTCCTAATTACAG
GACAGTTTTAAGGGTATTAGCTCCAATCTTGGAACAAAAAGAAAAAACTAAGAGTATCCGCAGCCCTGGTTGGAGGGGGA
CAACACTTTCCGTTAAAACTCGTGAGGGACAAGATTTATCAGTCGATTACAGCAACCATGTTTGGCAATGTGACCATACT
CGTGTAGATGTACTGCTGGTAGATCAGCATGGTGAACTTTTAAGTCGTCCCTGGCTGACAACTGTAATTGATACTTATTC
TCGTTGCATCATGGGTATTAATTTGGGCTTTGATGCGCCTAGTTCAGTTGTAGTAGCTTTAGCATTACGCCATGCGATTT
TGCCGAAAAAATATGGTGCAGAGTACAAACTGCACTGCGAATGGGGAACTTACGGTAAGCCAGAACATTTTTATACTGAT
GGGGGTAAAGATTTTCGTTCAAACCATTTAAGTCAAATCGGGGCGCAATTGGGGTTTGTTTGTCATTTACGCGATCGCCC
CAGTGAAGGTGGTATTGTTGAGCGTCCTTTTAAGACACTGAATGACCAACTATTTTCAACACTTCCAGGTTATACCGGAT
CTAATGTACAGGAACGCCTTGAAGATGCAGAGAAGGATGCAAAACTAACCTTGCGGGAACTAGAACAATTACTCGTTCGC
TACATTGTTGACCGCTATAACCAAAGTATTGATGCGCGAATGGGCGATCAAACCCGCTTTGGGCGTTGGGAAGCGGGATT
GCCTTCAGTACCAGTGCCAATCGAAGAACGTGATTTAGATATCTGCTTGATGAAACAGTCACGGCGCACAGTACAAAGAG
GCGGATGCTTACAGTTTCAAAATGTGATGTATCGAGGGGAGTATCTAGCAGGATATGCAGGGGAGACAGTTAATTTAAGA
TATGACCCCAGAGATATTACAACGGTGCTGGTTTATCGCCAAGAGAAAAGCCAAGAAGTTTTTCTGACTCGCACTCATGC
TCAAGGTTTGGAGACTGAGCAACTTTCATTAGATGAAGCTGAAGCAGCTAGTCGTAGACTGCGTAATGCAGGAAAGACTG
TCAGTAACCAAGCCTTATTGCAAGAAGTCCTTGAGCGTGACGCGATGGTAGCAAACAAGAAAAGTCGCAAGGAACGTCAA
AAATTAGAGCAGGCAATTTTGCGTTCTGCTGCGGTGAATGAAAGTAAAACTGAGTCCCTAGCATCTTCTGTTATGGAAGC
AGAAGAAGTGGAATCTACTACTGAGGTTCAATCTTCATCCTCAGAACTAGAGGTTTGGGACTATGAACAACTGCGTGAAG
AATACGGATTTTAA

Upstream 100 bases:

>100_bases
CTGCGGAAGCTTTATTACAAGACAACAACACACCTCCTCACCTCCTGAGACGAATCTGATTGTTACAGAACTCTCAGAGG
AAGCCCAACTCAAGCTAGAG

Downstream 100 bases:

>100_bases
ACAATGACAGATGCCAAAGCGATCGCTCAACAGTTAGGTGGGGTGAAACCGGATGAAGAATGGTTGCAAGCTGAAATTGC
TCGTCTCAAGGGTAAGAGTA

Product: transposase

Products: NA

Alternate protein names: ORF 480 [H]

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MIQTLLEPCDRTTYGQKLKEAADTLGVTVRTVQRLVKKWEEDGLVGFIQTGRADKGKHRIGEFWENFIIKTYKEGNKGSK
RMTPKQVALRVQAKARELGDSKPPNYRTVLRVLAPILEQKEKTKSIRSPGWRGTTLSVKTREGQDLSVDYSNHVWQCDHT
RVDVLLVDQHGELLSRPWLTTVIDTYSRCIMGINLGFDAPSSVVVALALRHAILPKKYGAEYKLHCEWGTYGKPEHFYTD
GGKDFRSNHLSQIGAQLGFVCHLRDRPSEGGIVERPFKTLNDQLFSTLPGYTGSNVQERLEDAEKDAKLTLRELEQLLVR
YIVDRYNQSIDARMGDQTRFGRWEAGLPSVPVPIEERDLDICLMKQSRRTVQRGGCLQFQNVMYRGEYLAGYAGETVNLR
YDPRDITTVLVYRQEKSQEVFLTRTHAQGLETEQLSLDEAEAASRRLRNAGKTVSNQALLQEVLERDAMVANKKSRKERQ
KLEQAILRSAAVNESKTESLASSVMEAEEVESTTEVQSSSSELEVWDYEQLREEYGF

Sequences:

>Translated_537_residues
MIQTLLEPCDRTTYGQKLKEAADTLGVTVRTVQRLVKKWEEDGLVGFIQTGRADKGKHRIGEFWENFIIKTYKEGNKGSK
RMTPKQVALRVQAKARELGDSKPPNYRTVLRVLAPILEQKEKTKSIRSPGWRGTTLSVKTREGQDLSVDYSNHVWQCDHT
RVDVLLVDQHGELLSRPWLTTVIDTYSRCIMGINLGFDAPSSVVVALALRHAILPKKYGAEYKLHCEWGTYGKPEHFYTD
GGKDFRSNHLSQIGAQLGFVCHLRDRPSEGGIVERPFKTLNDQLFSTLPGYTGSNVQERLEDAEKDAKLTLRELEQLLVR
YIVDRYNQSIDARMGDQTRFGRWEAGLPSVPVPIEERDLDICLMKQSRRTVQRGGCLQFQNVMYRGEYLAGYAGETVNLR
YDPRDITTVLVYRQEKSQEVFLTRTHAQGLETEQLSLDEAEAASRRLRNAGKTVSNQALLQEVLERDAMVANKKSRKERQ
KLEQAILRSAAVNESKTESLASSVMEAEEVESTTEVQSSSSELEVWDYEQLREEYGF
>Mature_537_residues
MIQTLLEPCDRTTYGQKLKEAADTLGVTVRTVQRLVKKWEEDGLVGFIQTGRADKGKHRIGEFWENFIIKTYKEGNKGSK
RMTPKQVALRVQAKARELGDSKPPNYRTVLRVLAPILEQKEKTKSIRSPGWRGTTLSVKTREGQDLSVDYSNHVWQCDHT
RVDVLLVDQHGELLSRPWLTTVIDTYSRCIMGINLGFDAPSSVVVALALRHAILPKKYGAEYKLHCEWGTYGKPEHFYTD
GGKDFRSNHLSQIGAQLGFVCHLRDRPSEGGIVERPFKTLNDQLFSTLPGYTGSNVQERLEDAEKDAKLTLRELEQLLVR
YIVDRYNQSIDARMGDQTRFGRWEAGLPSVPVPIEERDLDICLMKQSRRTVQRGGCLQFQNVMYRGEYLAGYAGETVNLR
YDPRDITTVLVYRQEKSQEVFLTRTHAQGLETEQLSLDEAEAASRRLRNAGKTVSNQALLQEVLERDAMVANKKSRKERQ
KLEQAILRSAAVNESKTESLASSVMEAEEVESTTEVQSSSSELEVWDYEQLREEYGF

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR015378
- InterPro:   IPR009004 [H]

Pfam domain/function: PF09299 Mu-transpos_C; PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 61189; Mature: 61189

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQTLLEPCDRTTYGQKLKEAADTLGVTVRTVQRLVKKWEEDGLVGFIQTGRADKGKHRI
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH
GEFWENFIIKTYKEGNKGSKRMTPKQVALRVQAKARELGDSKPPNYRTVLRVLAPILEQK
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
EKTKSIRSPGWRGTTLSVKTREGQDLSVDYSNHVWQCDHTRVDVLLVDQHGELLSRPWLT
HHHHHHCCCCCCCCEEEEEECCCCCEEEECCCCEEEECCCEEEEEEECCCCHHHHCCHHH
TVIDTYSRCIMGINLGFDAPSSVVVALALRHAILPKKYGAEYKLHCEWGTYGKPEHFYTD
HHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCHHCCCCEEEEECCCCCCCCCCEECC
GGKDFRSNHLSQIGAQLGFVCHLRDRPSEGGIVERPFKTLNDQLFSTLPGYTGSNVQERL
CCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHH
EDAEKDAKLTLRELEQLLVRYIVDRYNQSIDARMGDQTRFGRWEAGLPSVPVPIEERDLD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ICLMKQSRRTVQRGGCLQFQNVMYRGEYLAGYAGETVNLRYDPRDITTVLVYRQEKSQEV
CEEHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCEEEEEECCCCEEEEEEEECCCCCEE
FLTRTHAQGLETEQLSLDEAEAASRRLRNAGKTVSNQALLQEVLERDAMVANKKSRKERQ
EEEECCCCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLEQAILRSAAVNESKTESLASSVMEAEEVESTTEVQSSSSELEVWDYEQLREEYGF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHCC
>Mature Secondary Structure
MIQTLLEPCDRTTYGQKLKEAADTLGVTVRTVQRLVKKWEEDGLVGFIQTGRADKGKHRI
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH
GEFWENFIIKTYKEGNKGSKRMTPKQVALRVQAKARELGDSKPPNYRTVLRVLAPILEQK
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
EKTKSIRSPGWRGTTLSVKTREGQDLSVDYSNHVWQCDHTRVDVLLVDQHGELLSRPWLT
HHHHHHCCCCCCCCEEEEEECCCCCEEEECCCCEEEECCCEEEEEEECCCCHHHHCCHHH
TVIDTYSRCIMGINLGFDAPSSVVVALALRHAILPKKYGAEYKLHCEWGTYGKPEHFYTD
HHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCHHCCCCEEEEECCCCCCCCCCEECC
GGKDFRSNHLSQIGAQLGFVCHLRDRPSEGGIVERPFKTLNDQLFSTLPGYTGSNVQERL
CCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHH
EDAEKDAKLTLRELEQLLVRYIVDRYNQSIDARMGDQTRFGRWEAGLPSVPVPIEERDLD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ICLMKQSRRTVQRGGCLQFQNVMYRGEYLAGYAGETVNLRYDPRDITTVLVYRQEKSQEV
CEEHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCEEEEEECCCCEEEEEEEECCCCCEE
FLTRTHAQGLETEQLSLDEAEAASRRLRNAGKTVSNQALLQEVLERDAMVANKKSRKERQ
EEEECCCCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLEQAILRSAAVNESKTESLASSVMEAEEVESTTEVQSSSSELEVWDYEQLREEYGF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2170815 [H]