| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231120
Identifier: 17231120
GI number: 17231120
Start: 4378414
End: 4378920
Strand: Reverse
Name: 17231120
Synonym: all3628
Alternate gene names: NA
Gene position: 4378920-4378414 (Counterclockwise)
Preceding gene: 17231121
Following gene: 17231118
Centisome position: 68.27
GC content: 43.98
Gene sequence:
>507_bases GTGATGGCAGCACCAGATGTTAAGCCTTGGCTTTTTATTATCCAACCTTATGAAGGGGAAAGCTTGAGCCATTTTCTAGG TCGATTTAGACGTGCTAACCATTTATCTGCTAGTGGGTTGGGTAAATTGGCAGGAATTGGTGCAGTAGTTGCAAGGTGGG AGCGATTTCACTTTAATCCTCGTCCTAGCCAAAAAGAATTAGAAGCGATCGCATCTCTAGTAGAAGTAGATGCAGACAGG TTAGCTCAAATGCTGCCACCTTTGGGAGTTGGTATGCAGCATGAGCCAATACGCCTGTGTGGAGCTTGTTATGCTGAAGC ACCTTGTCACCGAATTGAGTGGCAGTATAAATCAGTATGGAAATGCGATCGCCACGAACTCAAGATTTTAGCGAAGTGTC CAAATTGTGAAGCACCTTTCAAAATACCTGCGCTGTGGGAGGATAAGTGTTGTCATAGGTGTCGAACACCTTTTGCAGAA ATGACTAAGTATCAAAAAATTACCTGA
Upstream 100 bases:
>100_bases GGTTAGATGAAATTCTCAGGGAAGCAGCAATTCGTTCTCTATCAAGGGGATTAAAGAAAATTGACAAGCCTGTTTTACAG GAAGTGGCGCAGGAGTATAA
Downstream 100 bases:
>100_bases GTCTTAAAAATCACTACTGCTTGAATTTTTGGTACGATATCCCTGATTGGGGTGAGTAAGTTTGTCAGGATATCGCAACT CCAGTTGACCTTTCTTGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MMAAPDVKPWLFIIQPYEGESLSHFLGRFRRANHLSASGLGKLAGIGAVVARWERFHFNPRPSQKELEAIASLVEVDADR LAQMLPPLGVGMQHEPIRLCGACYAEAPCHRIEWQYKSVWKCDRHELKILAKCPNCEAPFKIPALWEDKCCHRCRTPFAE MTKYQKIT
Sequences:
>Translated_168_residues MMAAPDVKPWLFIIQPYEGESLSHFLGRFRRANHLSASGLGKLAGIGAVVARWERFHFNPRPSQKELEAIASLVEVDADR LAQMLPPLGVGMQHEPIRLCGACYAEAPCHRIEWQYKSVWKCDRHELKILAKCPNCEAPFKIPALWEDKCCHRCRTPFAE MTKYQKIT >Mature_168_residues MMAAPDVKPWLFIIQPYEGESLSHFLGRFRRANHLSASGLGKLAGIGAVVARWERFHFNPRPSQKELEAIASLVEVDADR LAQMLPPLGVGMQHEPIRLCGACYAEAPCHRIEWQYKSVWKCDRHELKILAKCPNCEAPFKIPALWEDKCCHRCRTPFAE MTKYQKIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19204; Mature: 19204
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAAPDVKPWLFIIQPYEGESLSHFLGRFRRANHLSASGLGKLAGIGAVVARWERFHFNP CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC RPSQKELEAIASLVEVDADRLAQMLPPLGVGMQHEPIRLCGACYAEAPCHRIEWQYKSVW CCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH KCDRHELKILAKCPNCEAPFKIPALWEDKCCHRCRTPFAEMTKYQKIT HCCHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCC >Mature Secondary Structure MMAAPDVKPWLFIIQPYEGESLSHFLGRFRRANHLSASGLGKLAGIGAVVARWERFHFNP CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC RPSQKELEAIASLVEVDADRLAQMLPPLGVGMQHEPIRLCGACYAEAPCHRIEWQYKSVW CCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH KCDRHELKILAKCPNCEAPFKIPALWEDKCCHRCRTPFAEMTKYQKIT HCCHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA