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The map label for this gene is 17231076

Identifier: 17231076

GI number: 17231076

Start: 4329217

End: 4330290

Strand: Direct

Name: 17231076

Synonym: alr3584

Alternate gene names: NA

Gene position: 4329217-4330290 (Clockwise)

Preceding gene: 17231075

Following gene: 17231080

Centisome position: 67.5

GC content: 42.74

Gene sequence:

>1074_bases
ATGACACAACAGCATTTATTCCCTAGCACTAAAGCCAAGAGCTACAAGTTGTTTTGTTTTTACCTATTAATTTTGACTTC
GTTGCTGCACCCCGCGACCGCAGGTGCGGCTGATATTACTCAACAACTCCATCGTCCTGTTAATAGTTCTATGGGACGGC
AATCTAGAGATGAAGCAGACTCATTATTACGGGTGGCTGAACAACAATATGCTGCTGGATGTGCAGACAAAGCCATTGAC
TCTGGTTTGCAAGCGTTGGATATTTATCACCTGATTGGTGATCTGAGGGCAAAAGGTTTAACTTATAATTTGTTAGCAAA
AGCTTATATTGAGTTAGGACGTTTTAAAGAAGGTGAAGACGCATTACGACGAAGGTTAGCGATCGCTCGTGATACTAAAG
ACTTTCAATCACAAATTTTCGCCTTGAATAATCTTGGCACGTTGCTACTACAAGCAGGTGAACCCAAAGCCGCCGGAGAA
ACAATTCAAGAAGCCTACACGATCGCTGACAATGTGAAAAATATTGATGGTGAAGGACTATCCTTGAGTAACTTGGGTCT
TGTATCGTCTAGGCTGGGAGATTACAACAAGGCGATCAAACTTTATGAAACAGCTTTAATTTTCCGCCGTCGGACTGGGG
ACGCACCAGGAGAAATGAATACTTTAAATAACTTAGGCGATGCTTACCTAGCGGCTGGCAATTACCCAGATACAATTGGT
ACTTATGGCGCAGCTATGAGGATTGCCAAAACTCTAGGCGATCGCTCTAACCAATTACGCGCCATTGATGGTTTAGTCAC
AGCTCACAGCGCTGTCGGACGTTATGAACGCGCCTTTGACTTGCTACAACAGCGTTTAACCATCGCTCAAGAATTACAAA
ATCTGCGAGAAGAATTAAAGTCCTTTGAATCCTACGCAAAATTATACGAGCAGCTAGGTAACTACCCAACCGCCCGTAAT
TTTTACGAAAGAGCAATCATAATTTCACAAACCCTAGAGGATAACAAACAAGAAGTGTTTTTACGCGATCGCCTGACGCA
AATGTTGAGGAGTCAAAAGTCTATACTCAAGTAA

Upstream 100 bases:

>100_bases
TAGGTTAAGTATATACGCGTATACTGCTAGTCTTCATGCTGACATAATAAAACTTTTCTGCCAGCTTTTACTTAAAACCG
CAATTTCATGGGTAAGTTTT

Downstream 100 bases:

>100_bases
CAACTAACAATTGACAACCGACTAGTTCAAAAACACGGAACCGTTATTTTCAATTCTCAACGTGTTTCTGTCTTGACCAA
CGTTAGTAGTTTCTCTCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Family; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MTQQHLFPSTKAKSYKLFCFYLLILTSLLHPATAGAADITQQLHRPVNSSMGRQSRDEADSLLRVAEQQYAAGCADKAID
SGLQALDIYHLIGDLRAKGLTYNLLAKAYIELGRFKEGEDALRRRLAIARDTKDFQSQIFALNNLGTLLLQAGEPKAAGE
TIQEAYTIADNVKNIDGEGLSLSNLGLVSSRLGDYNKAIKLYETALIFRRRTGDAPGEMNTLNNLGDAYLAAGNYPDTIG
TYGAAMRIAKTLGDRSNQLRAIDGLVTAHSAVGRYERAFDLLQQRLTIAQELQNLREELKSFESYAKLYEQLGNYPTARN
FYERAIIISQTLEDNKQEVFLRDRLTQMLRSQKSILK

Sequences:

>Translated_357_residues
MTQQHLFPSTKAKSYKLFCFYLLILTSLLHPATAGAADITQQLHRPVNSSMGRQSRDEADSLLRVAEQQYAAGCADKAID
SGLQALDIYHLIGDLRAKGLTYNLLAKAYIELGRFKEGEDALRRRLAIARDTKDFQSQIFALNNLGTLLLQAGEPKAAGE
TIQEAYTIADNVKNIDGEGLSLSNLGLVSSRLGDYNKAIKLYETALIFRRRTGDAPGEMNTLNNLGDAYLAAGNYPDTIG
TYGAAMRIAKTLGDRSNQLRAIDGLVTAHSAVGRYERAFDLLQQRLTIAQELQNLREELKSFESYAKLYEQLGNYPTARN
FYERAIIISQTLEDNKQEVFLRDRLTQMLRSQKSILK
>Mature_356_residues
TQQHLFPSTKAKSYKLFCFYLLILTSLLHPATAGAADITQQLHRPVNSSMGRQSRDEADSLLRVAEQQYAAGCADKAIDS
GLQALDIYHLIGDLRAKGLTYNLLAKAYIELGRFKEGEDALRRRLAIARDTKDFQSQIFALNNLGTLLLQAGEPKAAGET
IQEAYTIADNVKNIDGEGLSLSNLGLVSSRLGDYNKAIKLYETALIFRRRTGDAPGEMNTLNNLGDAYLAAGNYPDTIGT
YGAAMRIAKTLGDRSNQLRAIDGLVTAHSAVGRYERAFDLLQQRLTIAQELQNLREELKSFESYAKLYEQLGNYPTARNF
YERAIIISQTLEDNKQEVFLRDRLTQMLRSQKSILK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI224028289, Length=308, Percent_Identity=26.2987012987013, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI164519122, Length=292, Percent_Identity=26.7123287671233, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI224548925, Length=280, Percent_Identity=23.9285714285714, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI224548927, Length=280, Percent_Identity=23.9285714285714, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24650658, Length=258, Percent_Identity=27.1317829457364, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24660950, Length=209, Percent_Identity=25.8373205741627, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39812; Mature: 39681

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQHLFPSTKAKSYKLFCFYLLILTSLLHPATAGAADITQQLHRPVNSSMGRQSRDEAD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
SLLRVAEQQYAAGCADKAIDSGLQALDIYHLIGDLRAKGLTYNLLAKAYIELGRFKEGED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHH
ALRRRLAIARDTKDFQSQIFALNNLGTLLLQAGEPKAAGETIQEAYTIADNVKNIDGEGL
HHHHHHHHHHCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCC
SLSNLGLVSSRLGDYNKAIKLYETALIFRRRTGDAPGEMNTLNNLGDAYLAAGNYPDTIG
CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHEECCCCCCHHH
TYGAAMRIAKTLGDRSNQLRAIDGLVTAHSAVGRYERAFDLLQQRLTIAQELQNLREELK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFESYAKLYEQLGNYPTARNFYERAIIISQTLEDNKQEVFLRDRLTQMLRSQKSILK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQQHLFPSTKAKSYKLFCFYLLILTSLLHPATAGAADITQQLHRPVNSSMGRQSRDEAD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
SLLRVAEQQYAAGCADKAIDSGLQALDIYHLIGDLRAKGLTYNLLAKAYIELGRFKEGED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHH
ALRRRLAIARDTKDFQSQIFALNNLGTLLLQAGEPKAAGETIQEAYTIADNVKNIDGEGL
HHHHHHHHHHCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCC
SLSNLGLVSSRLGDYNKAIKLYETALIFRRRTGDAPGEMNTLNNLGDAYLAAGNYPDTIG
CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHEECCCCCCHHH
TYGAAMRIAKTLGDRSNQLRAIDGLVTAHSAVGRYERAFDLLQQRLTIAQELQNLREELK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFESYAKLYEQLGNYPTARNFYERAIIISQTLEDNKQEVFLRDRLTQMLRSQKSILK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA