| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231075
Identifier: 17231075
GI number: 17231075
Start: 4328478
End: 4329119
Strand: Direct
Name: 17231075
Synonym: alr3583
Alternate gene names: NA
Gene position: 4328478-4329119 (Clockwise)
Preceding gene: 17231069
Following gene: 17231076
Centisome position: 67.49
GC content: 43.61
Gene sequence:
>642_bases ATGGCCAAAGTTATGCAAATTCCTCATTTTTCTGAAGCTAATCACCCACTGGTAAAGTCTCTTTTTCACCACAGTGACCA AGAATTGCTGGATCTGTTTCAGTATCATCCCGATGCTGGTAAGTACTTTACAGTGATTTTCTGCCGTTATAGCCCAATAG TCTACACGTTGATTCAACATTCTGCGCGATCGCCTGTACAGGCCGATTATCTTTTTGCTCTGACTTGGCGACATATCTAT TACGAACTTGGTGGACTGGATTTAAAAAATCCTCTCCCAGGTCAAGAGGGGTTGACCTTACAAAATTGGCTGATTAATAT CACAGCTTACTGTATCAACGAAATTCAATTACCCCCAACAGAAGCCATTCACTATTCTCTGCAAGCAACTTCACCACCAC TCTGGTGCTATGTCGAACAAGCATTAGACCAACTGCCCCCCATGTTACGGTTGATGGTTTTGATGGCGCAAACCTTTCAT TGGAGCGAAACTCGCATTGCTGCTTATCTACAAGCAGAAGGGGAAAAGGTAACACCTGCTGAAGTAGCCAATTTTCTCCA AGAAGGCTATCGTATGCTAGAGGACAAATTACCCGCAGACATCCGCACTATCTACTTGGGCGAAGATTTGGTTAAGTCAT AG
Upstream 100 bases:
>100_bases GACTAAACTAGTCTGAGTCTTCGTTCTCAACAGACCTACATCAAGATATTATACGGCTGACTCAAAAATCTTATTGCCAA CTTTATTTTAATCAGTATCA
Downstream 100 bases:
>100_bases GTTAAGTATATACGCGTATACTGCTAGTCTTCATGCTGACATAATAAAACTTTTCTGCCAGCTTTTACTTAAAACCGCAA TTTCATGGGTAAGTTTTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MAKVMQIPHFSEANHPLVKSLFHHSDQELLDLFQYHPDAGKYFTVIFCRYSPIVYTLIQHSARSPVQADYLFALTWRHIY YELGGLDLKNPLPGQEGLTLQNWLINITAYCINEIQLPPTEAIHYSLQATSPPLWCYVEQALDQLPPMLRLMVLMAQTFH WSETRIAAYLQAEGEKVTPAEVANFLQEGYRMLEDKLPADIRTIYLGEDLVKS
Sequences:
>Translated_213_residues MAKVMQIPHFSEANHPLVKSLFHHSDQELLDLFQYHPDAGKYFTVIFCRYSPIVYTLIQHSARSPVQADYLFALTWRHIY YELGGLDLKNPLPGQEGLTLQNWLINITAYCINEIQLPPTEAIHYSLQATSPPLWCYVEQALDQLPPMLRLMVLMAQTFH WSETRIAAYLQAEGEKVTPAEVANFLQEGYRMLEDKLPADIRTIYLGEDLVKS >Mature_212_residues AKVMQIPHFSEANHPLVKSLFHHSDQELLDLFQYHPDAGKYFTVIFCRYSPIVYTLIQHSARSPVQADYLFALTWRHIYY ELGGLDLKNPLPGQEGLTLQNWLINITAYCINEIQLPPTEAIHYSLQATSPPLWCYVEQALDQLPPMLRLMVLMAQTFHW SETRIAAYLQAEGEKVTPAEVANFLQEGYRMLEDKLPADIRTIYLGEDLVKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24554; Mature: 24422
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVMQIPHFSEANHPLVKSLFHHSDQELLDLFQYHPDAGKYFTVIFCRYSPIVYTLIQH CCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHH SARSPVQADYLFALTWRHIYYELGGLDLKNPLPGQEGLTLQNWLINITAYCINEIQLPPT HCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCH EAIHYSLQATSPPLWCYVEQALDQLPPMLRLMVLMAQTFHWSETRIAAYLQAEGEKVTPA HHHEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHEEECCCCCCCHH EVANFLQEGYRMLEDKLPADIRTIYLGEDLVKS HHHHHHHHHHHHHHHCCCCCCEEEEECHHHHCC >Mature Secondary Structure AKVMQIPHFSEANHPLVKSLFHHSDQELLDLFQYHPDAGKYFTVIFCRYSPIVYTLIQH CCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHH SARSPVQADYLFALTWRHIYYELGGLDLKNPLPGQEGLTLQNWLINITAYCINEIQLPPT HCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCH EAIHYSLQATSPPLWCYVEQALDQLPPMLRLMVLMAQTFHWSETRIAAYLQAEGEKVTPA HHHEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHEEECCCCCCCHH EVANFLQEGYRMLEDKLPADIRTIYLGEDLVKS HHHHHHHHHHHHHHHCCCCCCEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA