Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17231069

Identifier: 17231069

GI number: 17231069

Start: 4320900

End: 4321250

Strand: Direct

Name: 17231069

Synonym: alr3577

Alternate gene names: NA

Gene position: 4320900-4321250 (Clockwise)

Preceding gene: 17231068

Following gene: 17231075

Centisome position: 67.37

GC content: 38.75

Gene sequence:

>351_bases
ATGACTAACGAAAATCTAGAAAATCAAAATAATCAAGCAAAAGAAATTAAACAACCAGTAAGTAAAGATTGGCATTCCCG
CGAGGAACCAACTGCCAAAGAAAGAAACTTAACAGCAAACCCAGGAGATAGAATTGCCGACGAACCCCAATCTATTGAAG
AGAAAGCCAAGAAGGTGGCTGTAGATGCACCAGACATCACAGGTGATCATATTAAAGTACCTACCTACTTTGTTGTTGAC
GAACCTAATGGTGAACAAAAAGCATTACATCACGTCAAAGATGCTGAAGAAATTTCTGATGTAATTCGTCAAGCTAGAGT
AGATGAGAACGGAAATCGTATTTGGTGGTAG

Upstream 100 bases:

>100_bases
CACCAAAATAGAAAAGTATCACTAGGGAAGGAACTCAATTAACATTTGATTTTTTAGAGTGTGTTAGTAAACAAAAAATA
TTTTAATCATCGAAATAGCC

Downstream 100 bases:

>100_bases
TTCTTAATTCTTTTTCCTATTTGTAGTGGTGTGACTGGACTAAAGTCGTACATTAGACGTAGGTTGGGTGGAGCGCAGCG
CATTATGATAGGTCGTAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MTNENLENQNNQAKEIKQPVSKDWHSREEPTAKERNLTANPGDRIADEPQSIEEKAKKVAVDAPDITGDHIKVPTYFVVD
EPNGEQKALHHVKDAEEISDVIRQARVDENGNRIWW

Sequences:

>Translated_116_residues
MTNENLENQNNQAKEIKQPVSKDWHSREEPTAKERNLTANPGDRIADEPQSIEEKAKKVAVDAPDITGDHIKVPTYFVVD
EPNGEQKALHHVKDAEEISDVIRQARVDENGNRIWW
>Mature_115_residues
TNENLENQNNQAKEIKQPVSKDWHSREEPTAKERNLTANPGDRIADEPQSIEEKAKKVAVDAPDITGDHIKVPTYFVVDE
PNGEQKALHHVKDAEEISDVIRQARVDENGNRIWW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13264; Mature: 13132

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNENLENQNNQAKEIKQPVSKDWHSREEPTAKERNLTANPGDRIADEPQSIEEKAKKVA
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
VDAPDITGDHIKVPTYFVVDEPNGEQKALHHVKDAEEISDVIRQARVDENGNRIWW
CCCCCCCCCEEECCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCEECC
>Mature Secondary Structure 
TNENLENQNNQAKEIKQPVSKDWHSREEPTAKERNLTANPGDRIADEPQSIEEKAKKVA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
VDAPDITGDHIKVPTYFVVDEPNGEQKALHHVKDAEEISDVIRQARVDENGNRIWW
CCCCCCCCCEEECCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA