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The map label for this gene is ycaP [C]

Identifier: 17230886

GI number: 17230886

Start: 4102124

End: 4102639

Strand: Direct

Name: ycaP [C]

Synonym: alr3394

Alternate gene names: 17230886

Gene position: 4102124-4102639 (Clockwise)

Preceding gene: 17230885

Following gene: 17230887

Centisome position: 63.96

GC content: 38.95

Gene sequence:

>516_bases
ATGAATTGGTTTTCTATAAATTGGCACGCAATTTTTGTACCTAGTATCAGTATTTTAGAGCTTGTAATCCGGGGATCATT
AGTTTATTTAGCTCTTTTTTCTGTGCTACGCTTGCTGCCTAGTAGACAGATGGGAACTTTAGGAATTACGGATTTGCTCG
TAGTTGTGCTATTTGCTGAAGCTGCTCAAAATGCTATGGCAAGTAACTATACATCAATTACTGAAGGGGCAATTCTCGTC
GGAACCGTAATTTTTTGGAGCTATTTTCTTAACTGGTTAGGCTATAAGCTTCCTATCGTTCAACGCTTCTTAAATCCACC
ACCATTACTGTTAGTAAAAAATGGTAAGACGATTGAACGGCATTTACAACGAGAATTAATCACAGAAGATGAGTTGAAAA
GCAAGTTACGTCAGCAAGGTGTAGAATTCTTAGCCGATGTCAAGTTGGCGTATATGGAAGCTGACGGTAGCATCAGTATT
ATTACATCGGAGTCAAAACTGGTGGCTAGGGAATAG

Upstream 100 bases:

>100_bases
ACGCTATGCCTTTAAATGATACGAATTCTGGAAATCGGCATTATAGACGGTAGGGCATGGGAAAGATAGGGGAGTCAATA
ATTAAAAATTACGAATTATT

Downstream 100 bases:

>100_bases
GGAGTAGTAATTGTTGACTGTTAACAGTTAACGGTCAACTAACAACTAACAACTATCAACCAAAGCGGGGTAAAATATGA
CAGTCGTATTCTGCCGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MNWFSINWHAIFVPSISILELVIRGSLVYLALFSVLRLLPSRQMGTLGITDLLVVVLFAEAAQNAMASNYTSITEGAILV
GTVIFWSYFLNWLGYKLPIVQRFLNPPPLLLVKNGKTIERHLQRELITEDELKSKLRQQGVEFLADVKLAYMEADGSISI
ITSESKLVARE

Sequences:

>Translated_171_residues
MNWFSINWHAIFVPSISILELVIRGSLVYLALFSVLRLLPSRQMGTLGITDLLVVVLFAEAAQNAMASNYTSITEGAILV
GTVIFWSYFLNWLGYKLPIVQRFLNPPPLLLVKNGKTIERHLQRELITEDELKSKLRQQGVEFLADVKLAYMEADGSISI
ITSESKLVARE
>Mature_171_residues
MNWFSINWHAIFVPSISILELVIRGSLVYLALFSVLRLLPSRQMGTLGITDLLVVVLFAEAAQNAMASNYTSITEGAILV
GTVIFWSYFLNWLGYKLPIVQRFLNPPPLLLVKNGKTIERHLQRELITEDELKSKLRQQGVEFLADVKLAYMEADGSISI
ITSESKLVARE

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19268; Mature: 19268

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWFSINWHAIFVPSISILELVIRGSLVYLALFSVLRLLPSRQMGTLGITDLLVVVLFAE
CCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
AAQNAMASNYTSITEGAILVGTVIFWSYFLNWLGYKLPIVQRFLNPPPLLLVKNGKTIER
HHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCHHHH
HLQRELITEDELKSKLRQQGVEFLADVKLAYMEADGSISIITSESKLVARE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MNWFSINWHAIFVPSISILELVIRGSLVYLALFSVLRLLPSRQMGTLGITDLLVVVLFAE
CCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
AAQNAMASNYTSITEGAILVGTVIFWSYFLNWLGYKLPIVQRFLNPPPLLLVKNGKTIER
HHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCHHHH
HLQRELITEDELKSKLRQQGVEFLADVKLAYMEADGSISIITSESKLVARE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA