Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17230505

Identifier: 17230505

GI number: 17230505

Start: 3656204

End: 3656947

Strand: Reverse

Name: 17230505

Synonym: all3013

Alternate gene names: NA

Gene position: 3656947-3656204 (Counterclockwise)

Preceding gene: 17230506

Following gene: 17230503

Centisome position: 57.02

GC content: 45.7

Gene sequence:

>744_bases
ATGGCTATGTCTTCTACACTACAACGGGCATTTACCAACGGCCGTGTACTGAAAGTAATTAGTGGTTTGAACAACTTTGA
CGCTGATAGCGTCGCAGCTATTATTAAAGCTGCTGAACTTGGTGGTGCAACTTTTGTGGATATCGCCGCCGATGCTGGAT
TGGTTCAGTTAGCTAAAAAATTGATTAATTTACCAGTTTGTGTATCAGCAGTAGATCCAGAAAAATTTGTCACAGCCGTA
GAAGCTGGTGCAGATTTGATTGAAATCGGTAATTTTGATACTTTTTATGCTCAAGGACGCAGATTTGAGGCTGCGGAAGT
ATTAGCGCTGACTAAACAAACCCGCGCGCTCTTACCCGAAATTACCCTATCTGTGACTGTTCCTCACATCCTAGAACTAG
ATCAACAGGTACAGCTAGCCGAAGAATTGGTAAAAGCTGGAGCAGATATCATCCAAACCGAAGGCGGTACAAGCAGCCAG
CCGACTCATCCTGGAAGCCTGGGATTAATTGAAAAAGCTGCTCCCACTTTGGCAGCAGCTTATGAAATTTCTCGTGCTGT
ATCAGTACCAGTATTGTGTGCTTCGGGTATTTCTAATGTTACTGCACCTCTGGCGATCGCCTCCGGTGCGGCTGGTGTTG
GTGTCGGTTCTGCTATCAACCAACTCAATAGCGAAGTAGCTATGATTGCTGCGGTGCGCGGCTTAGTGGAAGCTTTGAAA
ACCTTTGAGCGTGCAATTGTCTAG

Upstream 100 bases:

>100_bases
ATTGCAAGTATTTTCTACTCTTTTTTTAAATGAATTAGTTCTGTCTTTATCTGAGGGGCGGTAGAATAAACCTAATTTTC
GTAGCTTCAACAGAATAACT

Downstream 100 bases:

>100_bases
TTAACGCCGTGTGCAACTTTCTCCCAGACCTAACCCCCAACCCCTTCCCTTGTAGGGAAGGGGAGTAATAATTAAAGCCT
CTACGCCACTTGCTACAACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MAMSSTLQRAFTNGRVLKVISGLNNFDADSVAAIIKAAELGGATFVDIAADAGLVQLAKKLINLPVCVSAVDPEKFVTAV
EAGADLIEIGNFDTFYAQGRRFEAAEVLALTKQTRALLPEITLSVTVPHILELDQQVQLAEELVKAGADIIQTEGGTSSQ
PTHPGSLGLIEKAAPTLAAAYEISRAVSVPVLCASGISNVTAPLAIASGAAGVGVGSAINQLNSEVAMIAAVRGLVEALK
TFERAIV

Sequences:

>Translated_247_residues
MAMSSTLQRAFTNGRVLKVISGLNNFDADSVAAIIKAAELGGATFVDIAADAGLVQLAKKLINLPVCVSAVDPEKFVTAV
EAGADLIEIGNFDTFYAQGRRFEAAEVLALTKQTRALLPEITLSVTVPHILELDQQVQLAEELVKAGADIIQTEGGTSSQ
PTHPGSLGLIEKAAPTLAAAYEISRAVSVPVLCASGISNVTAPLAIASGAAGVGVGSAINQLNSEVAMIAAVRGLVEALK
TFERAIV
>Mature_246_residues
AMSSTLQRAFTNGRVLKVISGLNNFDADSVAAIIKAAELGGATFVDIAADAGLVQLAKKLINLPVCVSAVDPEKFVTAVE
AGADLIEIGNFDTFYAQGRRFEAAEVLALTKQTRALLPEITLSVTVPHILELDQQVQLAEELVKAGADIIQTEGGTSSQP
THPGSLGLIEKAAPTLAAAYEISRAVSVPVLCASGISNVTAPLAIASGAAGVGVGSAINQLNSEVAMIAAVRGLVEALKT
FERAIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25406; Mature: 25274

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMSSTLQRAFTNGRVLKVISGLNNFDADSVAAIIKAAELGGATFVDIAADAGLVQLAKK
CCCHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEHHCCCCHHHHHHH
LINLPVCVSAVDPEKFVTAVEAGADLIEIGNFDTFYAQGRRFEAAEVLALTKQTRALLPE
HHCCCEEEECCCHHHHHHHHHCCCCEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH
ITLSVTVPHILELDQQVQLAEELVKAGADIIQTEGGTSSQPTHPGSLGLIEKAAPTLAAA
HHHEEECHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
YEISRAVSVPVLCASGISNVTAPLAIASGAAGVGVGSAINQLNSEVAMIAAVRGLVEALK
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TFERAIV
HHHHHCC
>Mature Secondary Structure 
AMSSTLQRAFTNGRVLKVISGLNNFDADSVAAIIKAAELGGATFVDIAADAGLVQLAKK
CCHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEHHCCCCHHHHHHH
LINLPVCVSAVDPEKFVTAVEAGADLIEIGNFDTFYAQGRRFEAAEVLALTKQTRALLPE
HHCCCEEEECCCHHHHHHHHHCCCCEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH
ITLSVTVPHILELDQQVQLAEELVKAGADIIQTEGGTSSQPTHPGSLGLIEKAAPTLAAA
HHHEEECHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
YEISRAVSVPVLCASGISNVTAPLAIASGAAGVGVGSAINQLNSEVAMIAAVRGLVEALK
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TFERAIV
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA