Click here to switch to the map view.

The map label for this gene is 17230384

Identifier: 17230384

GI number: 17230384

Start: 3530311

End: 3531807

Strand: Direct

Name: 17230384

Synonym: alr2892

Alternate gene names: NA

Gene position: 3530311-3531807 (Clockwise)

Preceding gene: 17230382

Following gene: 17230387

Centisome position: 55.04

GC content: 42.89

Gene sequence:

>1497_bases
ATGTATCGCCTTAATCAAAGAGCCTGGAAACTATTGCTAGCAGAAGTGGAAAAATGTAGTGGTAATGACCAAGTTAGTAA
GATTGAACGGGAAATAGTAAATAAAAGGTTAGAAAAGCTACGTTCAGAAAAAGGCTCTCCTGCACAGATAGACGAACTAA
GAGATACAGTGGTGGACATATATCCACAATTCAGTGAGAAAATCCTCAAGCAAGCTGCAAAAGCTAATCAAGCGCCTGGA
ATATTTACCAAAATCAAATGGACAGTAATTCTCGTGGGTAGTTCGGCGGGGATTGTCTGGGTAGTGAATTTACCTTATCC
CATGATTCGCTGGCCTGTGGCGAGAACATTACCAATCCTACTGTTACCCAGCTATATGAGTATGGATTATCACTATCGGG
GAGTAATTCAAAATCTGGAGCAAGCTGACCAGTTAATTAATAAAGCTACGAGTTCATCTGATATTGAGGAGGGAGGAAAA
AAGGTCAAAGAAGCACAAAAACATCTAGATAATCTACCAGTTTGGTTTTTGGGATATTATCCCCAGGCTTACTGTAGTTT
GTTTGGTTGCAGTTGGCGATTCACTTTAGATGAGTTTGAAGCAGCTCGTCAACGGACAGCGCGAATTAGTGCCGTTGTTT
TTCAAGATAAGAACGCTTTAACACCTCTCAATCAAGGTGAACTAGCGATAGAATTGGCGAAAAAACAATATGAACAAGCT
ACTAATAGCAAAGATAGAGAACAGGCGATCGCTTCTTGGCAAGCAGGAATCGACCAGTTGGAAGAAATTCCCGCACAAAC
ATTAGCCGCAAAAACCGCAAAAGCGAAGCTAAGAGCCTACACACGGGATTTTGAAAACGCTCGAATTGGTAGTTTCATTG
TCGCGGCTCAAGAATTTGATCTCGCCGCCGAGAAAATCAAGCAAACACAGCCACAGACAGCCTCGGAATTATGGCAACAA
GCCATGAATCGCATCAACCAAGTTCCCTTAGAAAACCCTAGATACTTGGAAGCACAAAAGTTATTAGCAATTTACCAAGG
CAAAATTCAGGGCATTGTTGATCCTAAAAGTGGCAAATTGATTGAGGGAGCCAAACAATTCGCCTTGGCTGCTGCTCAAG
CCTCCCAAAACCCACCACATACAGAAACACAATGGAGGCAAATTGCTAAACTGTGGTCAACAGCAATTGAGCAATTAGAA
AATGTGCGCGTAGAAGAACCAGGTTATGTGGAAGCGCAGAAATTATTAGCAACGTACCAAACCAACTTAGGAATTATCGA
AACTCGACTGCAAGCTGAAACTGAGTCGCAGTCATCACTGAAACAAGCTAATGAGCAAATTCAAAGTTTGATTGCTGCTC
CTCCCTCCGACCCGCAACGGTTCCAAGGTCAAATACAAGGGATTATCAACCAACTCAACACTATCAAGCCGGGAACAACC
GCCTACCCTGAAGGGCAAAGACTACTGGCTTTGGCGCAGAAGCGACTGAAACAATAA

Upstream 100 bases:

>100_bases
ACCGTAGACTATTGACCTGATTACACGCTGTTTTATTTCTGCCAGTTAATTTTTTAGGTAATCCTGGGAATACTAGTATC
ATAAGTTCTATTTTATCTCT

Downstream 100 bases:

>100_bases
AACTTTGCTTTTATGAAAAATGTGTGTTACTGTTATAAATCGTGTGGTTAAGGACGTATAGCTCAGTTGGTTAGAGCGCT
ACGTTGACATCGTAGAGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MYRLNQRAWKLLLAEVEKCSGNDQVSKIEREIVNKRLEKLRSEKGSPAQIDELRDTVVDIYPQFSEKILKQAAKANQAPG
IFTKIKWTVILVGSSAGIVWVVNLPYPMIRWPVARTLPILLLPSYMSMDYHYRGVIQNLEQADQLINKATSSSDIEEGGK
KVKEAQKHLDNLPVWFLGYYPQAYCSLFGCSWRFTLDEFEAARQRTARISAVVFQDKNALTPLNQGELAIELAKKQYEQA
TNSKDREQAIASWQAGIDQLEEIPAQTLAAKTAKAKLRAYTRDFENARIGSFIVAAQEFDLAAEKIKQTQPQTASELWQQ
AMNRINQVPLENPRYLEAQKLLAIYQGKIQGIVDPKSGKLIEGAKQFALAAAQASQNPPHTETQWRQIAKLWSTAIEQLE
NVRVEEPGYVEAQKLLATYQTNLGIIETRLQAETESQSSLKQANEQIQSLIAAPPSDPQRFQGQIQGIINQLNTIKPGTT
AYPEGQRLLALAQKRLKQ

Sequences:

>Translated_498_residues
MYRLNQRAWKLLLAEVEKCSGNDQVSKIEREIVNKRLEKLRSEKGSPAQIDELRDTVVDIYPQFSEKILKQAAKANQAPG
IFTKIKWTVILVGSSAGIVWVVNLPYPMIRWPVARTLPILLLPSYMSMDYHYRGVIQNLEQADQLINKATSSSDIEEGGK
KVKEAQKHLDNLPVWFLGYYPQAYCSLFGCSWRFTLDEFEAARQRTARISAVVFQDKNALTPLNQGELAIELAKKQYEQA
TNSKDREQAIASWQAGIDQLEEIPAQTLAAKTAKAKLRAYTRDFENARIGSFIVAAQEFDLAAEKIKQTQPQTASELWQQ
AMNRINQVPLENPRYLEAQKLLAIYQGKIQGIVDPKSGKLIEGAKQFALAAAQASQNPPHTETQWRQIAKLWSTAIEQLE
NVRVEEPGYVEAQKLLATYQTNLGIIETRLQAETESQSSLKQANEQIQSLIAAPPSDPQRFQGQIQGIINQLNTIKPGTT
AYPEGQRLLALAQKRLKQ
>Mature_498_residues
MYRLNQRAWKLLLAEVEKCSGNDQVSKIEREIVNKRLEKLRSEKGSPAQIDELRDTVVDIYPQFSEKILKQAAKANQAPG
IFTKIKWTVILVGSSAGIVWVVNLPYPMIRWPVARTLPILLLPSYMSMDYHYRGVIQNLEQADQLINKATSSSDIEEGGK
KVKEAQKHLDNLPVWFLGYYPQAYCSLFGCSWRFTLDEFEAARQRTARISAVVFQDKNALTPLNQGELAIELAKKQYEQA
TNSKDREQAIASWQAGIDQLEEIPAQTLAAKTAKAKLRAYTRDFENARIGSFIVAAQEFDLAAEKIKQTQPQTASELWQQ
AMNRINQVPLENPRYLEAQKLLAIYQGKIQGIVDPKSGKLIEGAKQFALAAAQASQNPPHTETQWRQIAKLWSTAIEQLE
NVRVEEPGYVEAQKLLATYQTNLGIIETRLQAETESQSSLKQANEQIQSLIAAPPSDPQRFQGQIQGIINQLNTIKPGTT
AYPEGQRLLALAQKRLKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56146; Mature: 56146

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRLNQRAWKLLLAEVEKCSGNDQVSKIEREIVNKRLEKLRSEKGSPAQIDELRDTVVDI
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
YPQFSEKILKQAAKANQAPGIFTKIKWTVILVGSSAGIVWVVNLPYPMIRWPVARTLPIL
HHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCHHHHCCHHHHHHHH
LLPSYMSMDYHYRGVIQNLEQADQLINKATSSSDIEEGGKKVKEAQKHLDNLPVWFLGYY
HCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC
PQAYCSLFGCSWRFTLDEFEAARQRTARISAVVFQDKNALTPLNQGELAIELAKKQYEQA
HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHH
TNSKDREQAIASWQAGIDQLEEIPAQTLAAKTAKAKLRAYTRDFENARIGSFIVAAQEFD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEHHHHH
LAAEKIKQTQPQTASELWQQAMNRINQVPLENPRYLEAQKLLAIYQGKIQGIVDPKSGKL
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCEEECCCCCCH
IEGAKQFALAAAQASQNPPHTETQWRQIAKLWSTAIEQLENVRVEEPGYVEAQKLLATYQ
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
TNLGIIETRLQAETESQSSLKQANEQIQSLIAAPPSDPQRFQGQIQGIINQLNTIKPGTT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
AYPEGQRLLALAQKRLKQ
CCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MYRLNQRAWKLLLAEVEKCSGNDQVSKIEREIVNKRLEKLRSEKGSPAQIDELRDTVVDI
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
YPQFSEKILKQAAKANQAPGIFTKIKWTVILVGSSAGIVWVVNLPYPMIRWPVARTLPIL
HHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCHHHHCCHHHHHHHH
LLPSYMSMDYHYRGVIQNLEQADQLINKATSSSDIEEGGKKVKEAQKHLDNLPVWFLGYY
HCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEECCC
PQAYCSLFGCSWRFTLDEFEAARQRTARISAVVFQDKNALTPLNQGELAIELAKKQYEQA
HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHH
TNSKDREQAIASWQAGIDQLEEIPAQTLAAKTAKAKLRAYTRDFENARIGSFIVAAQEFD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEHHHHH
LAAEKIKQTQPQTASELWQQAMNRINQVPLENPRYLEAQKLLAIYQGKIQGIVDPKSGKL
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCEEECCCCCCH
IEGAKQFALAAAQASQNPPHTETQWRQIAKLWSTAIEQLENVRVEEPGYVEAQKLLATYQ
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
TNLGIIETRLQAETESQSSLKQANEQIQSLIAAPPSDPQRFQGQIQGIINQLNTIKPGTT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
AYPEGQRLLALAQKRLKQ
CCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA