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The map label for this gene is csoR [H]

Identifier: 17230248

GI number: 17230248

Start: 3353136

End: 3353537

Strand: Reverse

Name: csoR [H]

Synonym: all2756

Alternate gene names: 17230248

Gene position: 3353537-3353136 (Counterclockwise)

Preceding gene: 17230252

Following gene: 17230246

Centisome position: 52.29

GC content: 41.29

Gene sequence:

>402_bases
ATGAATGGATCAGACCAATTAGCTCAAGAATCCTTGCCTGTGCCTCAAAAAGTTGAAGAGTCCCACAATCATGATGCAGA
ACATGACCACAAACATCATACTCACGGACAGGCAGAGTCGGTTCACGCTCACGTTCATAGCGAAGAATCTTTACGGCGAA
TTGTCAATCGGTTGTCACGCATAGAAGGACACATTCGCGGTATCAAAACAATGGTGCAACAAAATAGCCCTTGTCCTGAC
GTTTTATTACAAATTGCTGCTGTACGGGGTGCATTAGATAAGGTAGCCAGAATTGTTCTCGATGAACATTTAACAGAATG
TATTGCCAGAGCTTCCAAAGAAGGCAATATAGAAGAAGAAATTAAGCAACTTAAAGCAGCGTTAGATAGATTTTTACCTT
AA

Upstream 100 bases:

>100_bases
TTGATTAATCTCACGCCGAAGTCTACGCGTAGCCTCACCTATTGAAGGGGCTGACCATCTCTAGGGTAGGATCTGAATAT
TACCAGCGCTATAACTCCCT

Downstream 100 bases:

>100_bases
TTTTTATATCGATTCCCGGCTTTTAAGATAAGTCGAGAATCTATTTTTTAGTAAGTTAAATTGTAGAATATTTGGACTAA
TCCAGTATCAAAGCTTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MNGSDQLAQESLPVPQKVEESHNHDAEHDHKHHTHGQAESVHAHVHSEESLRRIVNRLSRIEGHIRGIKTMVQQNSPCPD
VLLQIAAVRGALDKVARIVLDEHLTECIARASKEGNIEEEIKQLKAALDRFLP

Sequences:

>Translated_133_residues
MNGSDQLAQESLPVPQKVEESHNHDAEHDHKHHTHGQAESVHAHVHSEESLRRIVNRLSRIEGHIRGIKTMVQQNSPCPD
VLLQIAAVRGALDKVARIVLDEHLTECIARASKEGNIEEEIKQLKAALDRFLP
>Mature_133_residues
MNGSDQLAQESLPVPQKVEESHNHDAEHDHKHHTHGQAESVHAHVHSEESLRRIVNRLSRIEGHIRGIKTMVQQNSPCPD
VLLQIAAVRGALDKVARIVLDEHLTECIARASKEGNIEEEIKQLKAALDRFLP

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 14927; Mature: 14927

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGSDQLAQESLPVPQKVEESHNHDAEHDHKHHTHGQAESVHAHVHSEESLRRIVNRLSR
CCCHHHHHHHCCCCCHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHCCHHHHHHHHHHHHH
IEGHIRGIKTMVQQNSPCPDVLLQIAAVRGALDKVARIVLDEHLTECIARASKEGNIEEE
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IKQLKAALDRFLP
HHHHHHHHHHHCC
>Mature Secondary Structure
MNGSDQLAQESLPVPQKVEESHNHDAEHDHKHHTHGQAESVHAHVHSEESLRRIVNRLSR
CCCHHHHHHHCCCCCHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHCCHHHHHHHHHHHHH
IEGHIRGIKTMVQQNSPCPDVLLQIAAVRGALDKVARIVLDEHLTECIARASKEGNIEEE
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IKQLKAALDRFLP
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]