| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230246
Identifier: 17230246
GI number: 17230246
Start: 3352269
End: 3352808
Strand: Reverse
Name: 17230246
Synonym: all2754
Alternate gene names: NA
Gene position: 3352808-3352269 (Counterclockwise)
Preceding gene: 17230248
Following gene: 17230245
Centisome position: 52.28
GC content: 43.33
Gene sequence:
>540_bases ATGAATGACTTAGCTTTACCAGAAATCATACAAAGTATTTTAGATAAACACATTGAGCCAGATGCAGTCTTTTCTGCAAT TCTGCCAGCACTGGGAGAAGTATTACAATGCGATCGCTGTTTTCTTTACCTGAGAAATCCGCAAACCCGCCTTGGTAAAG TAGCTTATTGCTGGCGGCGACATCGAGATATTCCCGATATGATCAACTCCCAATGGAATTTAGAGCCGCCATCATTACCC GAAGAAGATCCCTTATTTGCGGCTGCGCTACGAACTGAGGCTTCCGTTTATGTTGAAGATGTGGAAACTGCAAGCCCAAA AGTTGTAAATAAAGAATTTGAGCGCAAGAACTTTGGACATCGAGCCTTGATTCATGCTCACTTTTGCCAAGATGGTCAAC TGTGGGGGATTCTACAACCTTGTGTCTTTGGTGAAAAACGCATCTGGTCAGATTTTGATCATGCTGTCATGACTCAATTG GAAAGAGAGTTAACGCCTTTAGCCGTTACCTACGTCACAGCAGAACAGAACCCAATGTGA
Upstream 100 bases:
>100_bases TAAGTACTTGTAGAAAATTAGCACATTATATGTGTCTATAGAGTGATGTGTTCAGTTATAGGTCATTGACAAGATATGAA AGTTTAGGATTTGCTTGTTA
Downstream 100 bases:
>100_bases ATGTAGCTTGATACTTGTGAAAAATCAGGAAAGCGATCGCATAACTTTTTCAGTGGTAACATCTCGCCGGAAAATAGACT CTAAATAAGTCATCGATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MNDLALPEIIQSILDKHIEPDAVFSAILPALGEVLQCDRCFLYLRNPQTRLGKVAYCWRRHRDIPDMINSQWNLEPPSLP EEDPLFAAALRTEASVYVEDVETASPKVVNKEFERKNFGHRALIHAHFCQDGQLWGILQPCVFGEKRIWSDFDHAVMTQL ERELTPLAVTYVTAEQNPM
Sequences:
>Translated_179_residues MNDLALPEIIQSILDKHIEPDAVFSAILPALGEVLQCDRCFLYLRNPQTRLGKVAYCWRRHRDIPDMINSQWNLEPPSLP EEDPLFAAALRTEASVYVEDVETASPKVVNKEFERKNFGHRALIHAHFCQDGQLWGILQPCVFGEKRIWSDFDHAVMTQL ERELTPLAVTYVTAEQNPM >Mature_179_residues MNDLALPEIIQSILDKHIEPDAVFSAILPALGEVLQCDRCFLYLRNPQTRLGKVAYCWRRHRDIPDMINSQWNLEPPSLP EEDPLFAAALRTEASVYVEDVETASPKVVNKEFERKNFGHRALIHAHFCQDGQLWGILQPCVFGEKRIWSDFDHAVMTQL ERELTPLAVTYVTAEQNPM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20558; Mature: 20558
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLALPEIIQSILDKHIEPDAVFSAILPALGEVLQCDRCFLYLRNPQTRLGKVAYCWRR CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHH HRDIPDMINSQWNLEPPSLPEEDPLFAAALRTEASVYVEDVETASPKVVNKEFERKNFGH CCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCHHHHEEHHCCCCCHHHHHHHHHHCCCC RALIHAHFCQDGQLWGILQPCVFGEKRIWSDFDHAVMTQLERELTPLAVTYVTAEQNPM HHEEEEECCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC >Mature Secondary Structure MNDLALPEIIQSILDKHIEPDAVFSAILPALGEVLQCDRCFLYLRNPQTRLGKVAYCWRR CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHH HRDIPDMINSQWNLEPPSLPEEDPLFAAALRTEASVYVEDVETASPKVVNKEFERKNFGH CCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCHHHHEEHHCCCCCHHHHHHHHHHCCCC RALIHAHFCQDGQLWGILQPCVFGEKRIWSDFDHAVMTQLERELTPLAVTYVTAEQNPM HHEEEEECCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA