Click here to switch to the map view.

The map label for this gene is ytxM [H]

Identifier: 17230245

GI number: 17230245

Start: 3351333

End: 3352154

Strand: Reverse

Name: ytxM [H]

Synonym: all2753

Alternate gene names: 17230245

Gene position: 3352154-3351333 (Counterclockwise)

Preceding gene: 17230246

Following gene: 17230242

Centisome position: 52.26

GC content: 33.7

Gene sequence:

>822_bases
ATGACTATAGAGAATTACCAATTTAATTATTCCCTAACTGGCAATACTGATAAACCTGTGATTCTGTTACTCCACGGTTT
CATGGGGAATATTGATGAATTTGACGCGGCTATAGAATTACTAGGTGATGATTTTTCTTATCTCAAACTTGACTTACCCG
GACATGGGAAAACTCAAGTGTTGGGTGGAGATGAATATTACTCAATGGCAAATACTGCTCAAGGCTTAATTAATTTATTA
GATAAATTAGAAATAACTAAATGCTTTTTAGTTGGCTATTCAATGGGTGGAAGATTAGGTTTATATTTAACTCTACATTT
TCCCCAACGTTTTTATCAAGTAGTCTTAGAATCATCCTCCCCAGGTTTAGCCACAGAAGCAGAACGATTAGATAGAGTTA
AACGCGATGCCCAAATAGCTAAGAAGCTAGGCAGAAGTTTAGAAAAAACCGATTTTACGACTTTTTTACTTAATTGGTAT
AATCAGCCTATTTTCGGCAATATAAAAAATTATCCAGAGTTTCCCAGGGTGATAGAAAGTCGATTGCAAAATCATCCCCT
GGAGTTAGTTAAATCATTACAATTTATGGGAATTGGTAGCCAGCTATCTTTATGGGAAAAACTGCAAAATAATCAGATTC
CTTTACTTTTACTTGTTGGTGAGAATGACAAAAAATTTATAGATATCAATGTCAAAATGACAAAGATAGCCCCAGCATCT
CAGCTAAAAATAATTAGTAATGCTGCACATAATATTCACTTTGAGAATACCTTAGAATTTGTGCAGAAACTAAATAATTT
TTTTGACATAACGAGGTACTGA

Upstream 100 bases:

>100_bases
TTGTGAAAAATCAGGAAAGCGATCGCATAACTTTTTCAGTGGTAACATCTCGCCGGAAAATAGACTCTAAATAAGTCATC
GATCGCTTTTCTTTTAAAAT

Downstream 100 bases:

>100_bases
GTACACCGCTAATAAAATTGGGCAATCTCCGCGCCCTCTGCGTTTAAAAACATTATTTCTGTACTAACTTAACTCTTAAT
CACTACAAGTGTTAACTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MTIENYQFNYSLTGNTDKPVILLLHGFMGNIDEFDAAIELLGDDFSYLKLDLPGHGKTQVLGGDEYYSMANTAQGLINLL
DKLEITKCFLVGYSMGGRLGLYLTLHFPQRFYQVVLESSSPGLATEAERLDRVKRDAQIAKKLGRSLEKTDFTTFLLNWY
NQPIFGNIKNYPEFPRVIESRLQNHPLELVKSLQFMGIGSQLSLWEKLQNNQIPLLLLVGENDKKFIDINVKMTKIAPAS
QLKIISNAAHNIHFENTLEFVQKLNNFFDITRY

Sequences:

>Translated_273_residues
MTIENYQFNYSLTGNTDKPVILLLHGFMGNIDEFDAAIELLGDDFSYLKLDLPGHGKTQVLGGDEYYSMANTAQGLINLL
DKLEITKCFLVGYSMGGRLGLYLTLHFPQRFYQVVLESSSPGLATEAERLDRVKRDAQIAKKLGRSLEKTDFTTFLLNWY
NQPIFGNIKNYPEFPRVIESRLQNHPLELVKSLQFMGIGSQLSLWEKLQNNQIPLLLLVGENDKKFIDINVKMTKIAPAS
QLKIISNAAHNIHFENTLEFVQKLNNFFDITRY
>Mature_272_residues
TIENYQFNYSLTGNTDKPVILLLHGFMGNIDEFDAAIELLGDDFSYLKLDLPGHGKTQVLGGDEYYSMANTAQGLINLLD
KLEITKCFLVGYSMGGRLGLYLTLHFPQRFYQVVLESSSPGLATEAERLDRVKRDAQIAKKLGRSLEKTDFTTFLLNWYN
QPIFGNIKNYPEFPRVIESRLQNHPLELVKSLQFMGIGSQLSLWEKLQNNQIPLLLLVGENDKKFIDINVKMTKIAPASQ
LKIISNAAHNIHFENTLEFVQKLNNFFDITRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]

Homologues:

Organism=Escherichia coli, GI1788598, Length=251, Percent_Identity=27.0916334661355, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639
- InterPro:   IPR022485 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 31176; Mature: 31045

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIENYQFNYSLTGNTDKPVILLLHGFMGNIDEFDAAIELLGDDFSYLKLDLPGHGKTQV
CCCCCEEEEEEECCCCCCCEEEEEECHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEE
LGGDEYYSMANTAQGLINLLDKLEITKCFLVGYSMGGRLGLYLTLHFPQRFYQVVLESSS
ECCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEECHHHHHHHHHCCCC
PGLATEAERLDRVKRDAQIAKKLGRSLEKTDFTTFLLNWYNQPIFGNIKNYPEFPRVIES
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
RLQNHPLELVKSLQFMGIGSQLSLWEKLQNNQIPLLLLVGENDKKFIDINVKMTKIAPAS
HHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEEEEECCCHH
QLKIISNAAHNIHFENTLEFVQKLNNFFDITRY
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TIENYQFNYSLTGNTDKPVILLLHGFMGNIDEFDAAIELLGDDFSYLKLDLPGHGKTQV
CCCCEEEEEEECCCCCCCEEEEEECHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEE
LGGDEYYSMANTAQGLINLLDKLEITKCFLVGYSMGGRLGLYLTLHFPQRFYQVVLESSS
ECCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEECHHHHHHHHHCCCC
PGLATEAERLDRVKRDAQIAKKLGRSLEKTDFTTFLLNWYNQPIFGNIKNYPEFPRVIES
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
RLQNHPLELVKSLQFMGIGSQLSLWEKLQNNQIPLLLLVGENDKKFIDINVKMTKIAPAS
HHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEEEEECCCHH
QLKIISNAAHNIHFENTLEFVQKLNNFFDITRY
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8566759; 9387221; 9384377 [H]