Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is yjeE [C]

Identifier: 17229792

GI number: 17229792

Start: 2770300

End: 2770788

Strand: Direct

Name: yjeE [C]

Synonym: alr2300

Alternate gene names: 17229792

Gene position: 2770300-2770788 (Clockwise)

Preceding gene: 17229790

Following gene: 17229796

Centisome position: 43.19

GC content: 38.45

Gene sequence:

>489_bases
ATGACTATTGACCAAATGACTATTGACCAAATGACTAAAATTTTTCTTGCAGATAAAGAGTCAACACTCAACTTAGGTAT
TCTCTTAGGAGAAACTTTAACTGCTGGTAGTGTGATTTTACTAGAAGGTGATTTAGGTGCTGGTAAAACTACTTTGGTAC
AGGGCTTGGGTAAAGGTTTAAGTATTACTGAACCCATTGTCAGTCCTACTTTTACTCTGATTAATGAGTACACAGAAGGA
CGTATACCCCTTTACCATCTGGATTTATACCGCTTAGAGCCACAAGAAGTATTAAGTTTAAATTTAGAAATTTATTGGGA
AGGGATTGAGATAATTCCGGGTATTGTAGCGATTGAGTGGTCGGAACGAATGCCCTACAAGCCAAGTACCTACATTAACG
TACTTTTGACTTATGGCGATGAGGGCAGTCGTCAAGCCGAAATTACACCATTCAATTGCACCATCAGCGATTTAATTGCT
ACCAAGTGA

Upstream 100 bases:

>100_bases
TCGAATAGCGTATTTAAAACCACATTTTCCATATATGACAGGAGGAAGGAGTTAGAGCGCAGTAGGGAAAAGAAAATTAT
TTGCAACTAACAACTGACTA

Downstream 100 bases:

>100_bases
ATGACTTTATTTCCGAATTGGGTAAAAACGCTGCTTAGTACTGTAGTAATATTAGGACTATTTGCCACTGAGTAGAAACA
GTAAAAAAGTTACCCCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTIDQMTIDQMTKIFLADKESTLNLGILLGETLTAGSVILLEGDLGAGKTTLVQGLGKGLSITEPIVSPTFTLINEYTEG
RIPLYHLDLYRLEPQEVLSLNLEIYWEGIEIIPGIVAIEWSERMPYKPSTYINVLLTYGDEGSRQAEITPFNCTISDLIA
TK

Sequences:

>Translated_162_residues
MTIDQMTIDQMTKIFLADKESTLNLGILLGETLTAGSVILLEGDLGAGKTTLVQGLGKGLSITEPIVSPTFTLINEYTEG
RIPLYHLDLYRLEPQEVLSLNLEIYWEGIEIIPGIVAIEWSERMPYKPSTYINVLLTYGDEGSRQAEITPFNCTISDLIA
TK
>Mature_161_residues
TIDQMTIDQMTKIFLADKESTLNLGILLGETLTAGSVILLEGDLGAGKTTLVQGLGKGLSITEPIVSPTFTLINEYTEGR
IPLYHLDLYRLEPQEVLSLNLEIYWEGIEIIPGIVAIEWSERMPYKPSTYINVLLTYGDEGSRQAEITPFNCTISDLIAT
K

Specific function: Unknown

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family

Homologues:

Organism=Escherichia coli, GI1790610, Length=138, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2300_NOSS1 (O52749)

Other databases:

- EMBL:   AF046871
- EMBL:   BA000019
- PIR:   AE2093
- RefSeq:   NP_486340.1
- ProteinModelPortal:   O52749
- SMR:   O52749
- STRING:   O52749
- GeneID:   1105897
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr2300
- NMPDR:   fig|103690.1.peg.2607
- eggNOG:   COG0802
- HOGENOM:   HBG734187
- OMA:   IVAIEWS
- PhylomeDB:   O52749
- ProtClustDB:   CLSK895720
- BioCyc:   NSP103690:ALR2300-MONOMER
- InterPro:   IPR003442
- TIGRFAMs:   TIGR00150

Pfam domain/function: PF02367 UPF0079

EC number: NA

Molecular weight: Translated: 17939; Mature: 17808

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDQMTIDQMTKIFLADKESTLNLGILLGETLTAGSVILLEGDLGAGKTTLVQGLGKGL
CCCCHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHCCCCC
SITEPIVSPTFTLINEYTEGRIPLYHLDLYRLEPQEVLSLNLEIYWEGIEIIPGIVAIEW
CCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEECHHHHHEEEEEEEECCEEECCEEEEEEE
SERMPYKPSTYINVLLTYGDEGSRQAEITPFNCTISDLIATK
CCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCHHHHCCCC
>Mature Secondary Structure 
TIDQMTIDQMTKIFLADKESTLNLGILLGETLTAGSVILLEGDLGAGKTTLVQGLGKGL
CCCHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHCCCCC
SITEPIVSPTFTLINEYTEGRIPLYHLDLYRLEPQEVLSLNLEIYWEGIEIIPGIVAIEW
CCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEECHHHHHEEEEEEEECCEEECCEEEEEEE
SERMPYKPSTYINVLLTYGDEGSRQAEITPFNCTISDLIATK
CCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9794762; 11759840