| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229788
Identifier: 17229788
GI number: 17229788
Start: 2766360
End: 2767640
Strand: Direct
Name: 17229788
Synonym: alr2296
Alternate gene names: NA
Gene position: 2766360-2767640 (Clockwise)
Preceding gene: 17229787
Following gene: 17229790
Centisome position: 43.13
GC content: 40.98
Gene sequence:
>1281_bases ATGTTAAAGCTATTTAAACCAAGCAAAAATGACGATATCCAGCCAGAGAATGTACCAGAGAAAGTTGTTTGGTGGGCGAT CGCTAATACCTATTATATTTGGGTCTTCGGTGGACTATATGTTGTTGGCTCCGTTATGGGTTGGGTGCTATTACTATTTT TAATAATTAAAATTTTGGCTCAAACCAAAGACACACCACCGGAGGAAAAAATTACTATTTCCTGGATTATTTGGGTTTGG ATTGTGGGAATGTTCTTCATGCAAGTAGCTTTAATTGCGGGACATTTAGATTTCAATTTGCCTACGAGTCTAATAATTAA ATCTTCCATTGGTTGGGCTAAAGGTTGGGCGGCATTGGCTCTCTATCCCTTAGCCGGGTGCTTGAAAATCCGGCCGCAAA TAATTTATCGGGCTGTTTGCATTGTCGGTTTTCATACCCTCATCATTACCCCTTTTTTACTATTAACACCTTATCTGCAT TTACCCCAAATTCTCTACGTTTCGCCACTCAGAGCAGTAGGGGGGCCTGGCAATGAATTTTTTGATGTACCTCTTTACGA AATAGACGGTAGTACAGGAGACTTACGCTGGCGACTATTTACACCTTGGGGGCCTGCATTAGGTTTTGTGGGTAATGTTT ACTTTATGCTGGCGCTGCAAGAAAAAGATAAAAAATGGCGCACCTTTGGATTAATCGGCTCAGTCTTGATGTGCTTTGTT TGTAAGTCTCGATTAGCTCAGGTTTGTATAATCATTATTCCCTTGCTAACAAAAGTTCTCTCTGGTTTAAATCGACCACG AATCTTGATTGGGTTGGGATTTTTCAGCTACCTGGGGGGTATTTTCTCCCCATCAATAATTCTCGCTTTTAATAATTTTT GGGAAGGATTCAAAGCTGCACGAGCAGGTTCTACAAGAGTACGTATGGCACTCAAGCGAATTGCGGTACATCGCTGGCAA ACAGGAGCCCCTATTTGGGGACATGGGGTAGTTGAAGATGGCCCCCACATTGTGGAATATATGCCCATCGGTTCACATCA TACATGGGCTGGTGTATTGTTTGTTAAAGGAGTTGTAGGGTTTATAGCAATTGCTCTACCAATGGGTTTAAGCTTCGTCT ATTTATTAATCAAGTCAATGGATAGCAGATGCCCAACTGCAAAAGTAGGCTTGAGTGTGGTGATGATTCTTTTCCTTTAT ACCTTTGGTGAAAATTTGGAAATACTAGTATATTTATATTGGCCTGGACTATTGGTAATGGGTATCGGTTGTCAAGAATA A
Upstream 100 bases:
>100_bases CTTGGATAGAAAAGTTATCTAAGTGGTTATCTTGATAATTCGTAATTAGCGCTAGTGTGAACAATTTTGAATAGTTATTA GGGATTTTTGGAAGGGATGA
Downstream 100 bases:
>100_bases TCTAAATTCTGGCTGAGTTTGGGAAAAAATCACATTTGATACCAAGCTGTCAAAGCTACAGCCAAGGCATCAGCAGCATC ATCTGGCCGAGGAATTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MLKLFKPSKNDDIQPENVPEKVVWWAIANTYYIWVFGGLYVVGSVMGWVLLLFLIIKILAQTKDTPPEEKITISWIIWVW IVGMFFMQVALIAGHLDFNLPTSLIIKSSIGWAKGWAALALYPLAGCLKIRPQIIYRAVCIVGFHTLIITPFLLLTPYLH LPQILYVSPLRAVGGPGNEFFDVPLYEIDGSTGDLRWRLFTPWGPALGFVGNVYFMLALQEKDKKWRTFGLIGSVLMCFV CKSRLAQVCIIIIPLLTKVLSGLNRPRILIGLGFFSYLGGIFSPSIILAFNNFWEGFKAARAGSTRVRMALKRIAVHRWQ TGAPIWGHGVVEDGPHIVEYMPIGSHHTWAGVLFVKGVVGFIAIALPMGLSFVYLLIKSMDSRCPTAKVGLSVVMILFLY TFGENLEILVYLYWPGLLVMGIGCQE
Sequences:
>Translated_426_residues MLKLFKPSKNDDIQPENVPEKVVWWAIANTYYIWVFGGLYVVGSVMGWVLLLFLIIKILAQTKDTPPEEKITISWIIWVW IVGMFFMQVALIAGHLDFNLPTSLIIKSSIGWAKGWAALALYPLAGCLKIRPQIIYRAVCIVGFHTLIITPFLLLTPYLH LPQILYVSPLRAVGGPGNEFFDVPLYEIDGSTGDLRWRLFTPWGPALGFVGNVYFMLALQEKDKKWRTFGLIGSVLMCFV CKSRLAQVCIIIIPLLTKVLSGLNRPRILIGLGFFSYLGGIFSPSIILAFNNFWEGFKAARAGSTRVRMALKRIAVHRWQ TGAPIWGHGVVEDGPHIVEYMPIGSHHTWAGVLFVKGVVGFIAIALPMGLSFVYLLIKSMDSRCPTAKVGLSVVMILFLY TFGENLEILVYLYWPGLLVMGIGCQE >Mature_426_residues MLKLFKPSKNDDIQPENVPEKVVWWAIANTYYIWVFGGLYVVGSVMGWVLLLFLIIKILAQTKDTPPEEKITISWIIWVW IVGMFFMQVALIAGHLDFNLPTSLIIKSSIGWAKGWAALALYPLAGCLKIRPQIIYRAVCIVGFHTLIITPFLLLTPYLH LPQILYVSPLRAVGGPGNEFFDVPLYEIDGSTGDLRWRLFTPWGPALGFVGNVYFMLALQEKDKKWRTFGLIGSVLMCFV CKSRLAQVCIIIIPLLTKVLSGLNRPRILIGLGFFSYLGGIFSPSIILAFNNFWEGFKAARAGSTRVRMALKRIAVHRWQ TGAPIWGHGVVEDGPHIVEYMPIGSHHTWAGVLFVKGVVGFIAIALPMGLSFVYLLIKSMDSRCPTAKVGLSVVMILFLY TFGENLEILVYLYWPGLLVMGIGCQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47715; Mature: 47715
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLFKPSKNDDIQPENVPEKVVWWAIANTYYIWVFGGLYVVGSVMGWVLLLFLIIKILA CCCCCCCCCCCCCCCCCCCCHHEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH QTKDTPPEEKITISWIIWVWIVGMFFMQVALIAGHLDFNLPTSLIIKSSIGWAKGWAALA HCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCHHHHHHHH LYPLAGCLKIRPQIIYRAVCIVGFHTLIITPFLLLTPYLHLPQILYVSPLRAVGGPGNEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHCCHHHCCCCCCCE FDVPLYEIDGSTGDLRWRLFTPWGPALGFVGNVYFMLALQEKDKKWRTFGLIGSVLMCFV EECCEEEECCCCCCEEEEEECCCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHH CKSRLAQVCIIIIPLLTKVLSGLNRPRILIGLGFFSYLGGIFSPSIILAFNNFWEGFKAA HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCEEEEEHHHHHHHHHH RAGSTRVRMALKRIAVHRWQTGAPIWGHGVVEDGPHIVEYMPIGSHHTWAGVLFVKGVVG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH FIAIALPMGLSFVYLLIKSMDSRCPTAKVGLSVVMILFLYTFGENLEILVYLYWPGLLVM HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHC GIGCQE CCCCCC >Mature Secondary Structure MLKLFKPSKNDDIQPENVPEKVVWWAIANTYYIWVFGGLYVVGSVMGWVLLLFLIIKILA CCCCCCCCCCCCCCCCCCCCHHEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH QTKDTPPEEKITISWIIWVWIVGMFFMQVALIAGHLDFNLPTSLIIKSSIGWAKGWAALA HCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCHHHHHHHH LYPLAGCLKIRPQIIYRAVCIVGFHTLIITPFLLLTPYLHLPQILYVSPLRAVGGPGNEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHCCHHHCCCCCCCE FDVPLYEIDGSTGDLRWRLFTPWGPALGFVGNVYFMLALQEKDKKWRTFGLIGSVLMCFV EECCEEEECCCCCCEEEEEECCCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHH CKSRLAQVCIIIIPLLTKVLSGLNRPRILIGLGFFSYLGGIFSPSIILAFNNFWEGFKAA HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCEEEEEHHHHHHHHHH RAGSTRVRMALKRIAVHRWQTGAPIWGHGVVEDGPHIVEYMPIGSHHTWAGVLFVKGVVG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH FIAIALPMGLSFVYLLIKSMDSRCPTAKVGLSVVMILFLYTFGENLEILVYLYWPGLLVM HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHC GIGCQE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA