| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229787
Identifier: 17229787
GI number: 17229787
Start: 2764897
End: 2766294
Strand: Direct
Name: 17229787
Synonym: alr2295
Alternate gene names: NA
Gene position: 2764897-2766294 (Clockwise)
Preceding gene: 17229786
Following gene: 17229788
Centisome position: 43.11
GC content: 41.06
Gene sequence:
>1398_bases ATGACTAGACAACTTTTGATTGTGCCAATAGTCAAGTTAAAAAATCTGCTGACAGGCCGTTGGCTACGTTATGCGTTTCT CAGTGTCGCCGGGAACGCTCTCATCTGGGGAACTTCAATTCAATATTTAAAAGTTACCAAACCGACCTATACCAGTGAGT TCGCCCTAATCCTTTCTGGTGCTAGTTTTGGTGTTAACGTCAACCTACCAGGAATTGGTCAGGCAACATCTTCTAGTAGC TCTGCTATTGGTAGTTCTACTTATGATGCTAGGGCAAACTATGAATATATTTTTACCAGCGAGGCAGTTTTAAAGAAAGC CGCAGCGATCGCCAAAATACCAGAAGAACAATTTAGTAAACCCCGGATCAAACTGTTAGATAACAGCACAATCATGCAGT TTGAAGTCACAGGCAAAAGTCCTAAGGAAGCACAGAATAAATCCCTAGCTCTATATCAGGCTATGGTGCATCAAATTACT GTTTTACGAACTGGAGAAATCAATCAACGTAAAGACCCTACACAGAAAACCTTACTTTCATCTCAACAAAAACTAGAACG AGCGCAGAAACACCTTTCGGAATACAAATTACGTTCGGGTCTAAGTTTTCCCGATCAAATAGGCAACTTATCATCTAACA TTGAGCAGTTGCGACGGCAACGAGCCGAAGCCAAAGCGCAAGAAAACGCTACCAACCAAAAATTACAGCAGCTAGCTAAA AATATAGGATTGTCCCCCCAAGAAGCCGCAGATGCTTTTTTGCTGCGTGTAGACCAAATTTTTCAACAGAATCTCAAAGA CTACAGTGAAGCAACCACAACTCTAGAAATTTTAATGACTAAATATGGCCCTAACCATCCCCAGGTGGTAAAGGAAAGAA TTAGGCAAGAAGCTGCTTTAGCAGCTCTACTGGAACGTAGTCAAATTCTCTTAGAAAAACCTATGACTACAACTATATTG AACCGTTTAGCCTTAGCGGTGAATGGCTCTGGTCGAGATACTTTATTTCAGAATTTAGTTACCTACCAATCTGATCAAAA AGGACTCCAGTCTCAGGTAAAAACTTTAGATTCAGAAATTCAGCGTTTAGAAAAACGTTTAGAAATTCTCTCTCAGCGCC AATCTAAGTTAGAAAACCTAAAGCGGGATGTGCAGATTGCAGAAGCTATGTTTGCCTCTACCCTGACCAAATTAGATTTG GGACAAGGAGATATTTTTGCAGCCTATCCTTTAGTACAGATGTTGGTGGAACCTAATCTTCCCGATCAACCCACTGCACC CAAAAAAAGCTTTATTTTAGCTGGCTCTGCGGCTGGTTCTATCTTTTCCACCCTTGGCTTGTGCTTGGTGTGGATTCGTA AACCTTGGATAGAAAAGTTATCTAAGTGGTTATCTTGA
Upstream 100 bases:
>100_bases CAAATGATAGTGTAGCCTGCTATGACTCAAGAGTTGTGCAATTCCGGGATGTGATCCAAACCATCTTATCTCCCATTCCA ATTTTGCGAGATTTATTCAA
Downstream 100 bases:
>100_bases TAATTCGTAATTAGCGCTAGTGTGAACAATTTTGAATAGTTATTAGGGATTTTTGGAAGGGATGAATGTTAAAGCTATTT AAACCAAGCAAAAATGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MTRQLLIVPIVKLKNLLTGRWLRYAFLSVAGNALIWGTSIQYLKVTKPTYTSEFALILSGASFGVNVNLPGIGQATSSSS SAIGSSTYDARANYEYIFTSEAVLKKAAAIAKIPEEQFSKPRIKLLDNSTIMQFEVTGKSPKEAQNKSLALYQAMVHQIT VLRTGEINQRKDPTQKTLLSSQQKLERAQKHLSEYKLRSGLSFPDQIGNLSSNIEQLRRQRAEAKAQENATNQKLQQLAK NIGLSPQEAADAFLLRVDQIFQQNLKDYSEATTTLEILMTKYGPNHPQVVKERIRQEAALAALLERSQILLEKPMTTTIL NRLALAVNGSGRDTLFQNLVTYQSDQKGLQSQVKTLDSEIQRLEKRLEILSQRQSKLENLKRDVQIAEAMFASTLTKLDL GQGDIFAAYPLVQMLVEPNLPDQPTAPKKSFILAGSAAGSIFSTLGLCLVWIRKPWIEKLSKWLS
Sequences:
>Translated_465_residues MTRQLLIVPIVKLKNLLTGRWLRYAFLSVAGNALIWGTSIQYLKVTKPTYTSEFALILSGASFGVNVNLPGIGQATSSSS SAIGSSTYDARANYEYIFTSEAVLKKAAAIAKIPEEQFSKPRIKLLDNSTIMQFEVTGKSPKEAQNKSLALYQAMVHQIT VLRTGEINQRKDPTQKTLLSSQQKLERAQKHLSEYKLRSGLSFPDQIGNLSSNIEQLRRQRAEAKAQENATNQKLQQLAK NIGLSPQEAADAFLLRVDQIFQQNLKDYSEATTTLEILMTKYGPNHPQVVKERIRQEAALAALLERSQILLEKPMTTTIL NRLALAVNGSGRDTLFQNLVTYQSDQKGLQSQVKTLDSEIQRLEKRLEILSQRQSKLENLKRDVQIAEAMFASTLTKLDL GQGDIFAAYPLVQMLVEPNLPDQPTAPKKSFILAGSAAGSIFSTLGLCLVWIRKPWIEKLSKWLS >Mature_464_residues TRQLLIVPIVKLKNLLTGRWLRYAFLSVAGNALIWGTSIQYLKVTKPTYTSEFALILSGASFGVNVNLPGIGQATSSSSS AIGSSTYDARANYEYIFTSEAVLKKAAAIAKIPEEQFSKPRIKLLDNSTIMQFEVTGKSPKEAQNKSLALYQAMVHQITV LRTGEINQRKDPTQKTLLSSQQKLERAQKHLSEYKLRSGLSFPDQIGNLSSNIEQLRRQRAEAKAQENATNQKLQQLAKN IGLSPQEAADAFLLRVDQIFQQNLKDYSEATTTLEILMTKYGPNHPQVVKERIRQEAALAALLERSQILLEKPMTTTILN RLALAVNGSGRDTLFQNLVTYQSDQKGLQSQVKTLDSEIQRLEKRLEILSQRQSKLENLKRDVQIAEAMFASTLTKLDLG QGDIFAAYPLVQMLVEPNLPDQPTAPKKSFILAGSAAGSIFSTLGLCLVWIRKPWIEKLSKWLS
Specific function: Unknown
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51867; Mature: 51736
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRQLLIVPIVKLKNLLTGRWLRYAFLSVAGNALIWGTSIQYLKVTKPTYTSEFALILSG CCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCCCEEEEEEC ASFGVNVNLPGIGQATSSSSSAIGSSTYDARANYEYIFTSEAVLKKAAAIAKIPEEQFSK CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCHHHCCC PRIKLLDNSTIMQFEVTGKSPKEAQNKSLALYQAMVHQITVLRTGEINQRKDPTQKTLLS CCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH SQQKLERAQKHLSEYKLRSGLSFPDQIGNLSSNIEQLRRQRAEAKAQENATNQKLQQLAK HHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH NIGLSPQEAADAFLLRVDQIFQQNLKDYSEATTTLEILMTKYGPNHPQVVKERIRQEAAL HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AALLERSQILLEKPMTTTILNRLALAVNGSGRDTLFQNLVTYQSDQKGLQSQVKTLDSEI HHHHHHHHHHHHCCHHHHHHHHHHHEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QRLEKRLEILSQRQSKLENLKRDVQIAEAMFASTLTKLDLGQGDIFAAYPLVQMLVEPNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC PDQPTAPKKSFILAGSAAGSIFSTLGLCLVWIRKPWIEKLSKWLS CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TRQLLIVPIVKLKNLLTGRWLRYAFLSVAGNALIWGTSIQYLKVTKPTYTSEFALILSG CCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCCCEEEEEEC ASFGVNVNLPGIGQATSSSSSAIGSSTYDARANYEYIFTSEAVLKKAAAIAKIPEEQFSK CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCHHHCCC PRIKLLDNSTIMQFEVTGKSPKEAQNKSLALYQAMVHQITVLRTGEINQRKDPTQKTLLS CCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH SQQKLERAQKHLSEYKLRSGLSFPDQIGNLSSNIEQLRRQRAEAKAQENATNQKLQQLAK HHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH NIGLSPQEAADAFLLRVDQIFQQNLKDYSEATTTLEILMTKYGPNHPQVVKERIRQEAAL HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AALLERSQILLEKPMTTTILNRLALAVNGSGRDTLFQNLVTYQSDQKGLQSQVKTLDSEI HHHHHHHHHHHHCCHHHHHHHHHHHEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QRLEKRLEILSQRQSKLENLKRDVQIAEAMFASTLTKLDLGQGDIFAAYPLVQMLVEPNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC PDQPTAPKKSFILAGSAAGSIFSTLGLCLVWIRKPWIEKLSKWLS CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA