Click here to switch to the map view.

The map label for this gene is ybaL [H]

Identifier: 17229538

GI number: 17229538

Start: 2451588

End: 2453909

Strand: Direct

Name: ybaL [H]

Synonym: alr2046

Alternate gene names: 17229538

Gene position: 2451588-2453909 (Clockwise)

Preceding gene: 17229537

Following gene: 228963958

Centisome position: 38.22

GC content: 47.85

Gene sequence:

>2322_bases
GTGCAAGAAGATTTTAGATTAATTGTTGATTTAGTGTCAGTTCTCGCCGTTGCTGCCTGTGGTGGATTGTTTGCGGCGTT
GCTCAAACAACCTGTGCTGCTGGGCTATCTCATCGGCGGGATGGTAGTGGGGCCGGCTGGGCTGGGGCTGATTAAAGAAG
TTATTCAAGTAGAAACTCTGGCACAGTTTGGCGTTGCTTTCTTGTTGTTTGCCTTGGGTGTGGAATTTTCCTTTGCTGAA
TTGAAAAAAGTAAAGGCGATCGCCCTTGGTGGTGGTGGGCTGCAAATTGCCCTGACAATCTTAACTACAGTGCTGGTTTG
TGGGTTAACGGGAGCCTGGGGAGCCTTACCTGCTAAGGGCGTGTTTCTAGGGTCGATTCTCTCCCTATCATCTACAGCCG
TTGTTCTCAAGTGCTTGATGGAGCGTAACGAAACGGAAACGCCCCACGGTCAAGTAATGCTGGGGATTTTGGTAGTCCAG
GACTTGGCGCTGGGATTAATGCTAGCGGTGTTACCTGCTTTGCATGAACCGGGGGAAGTTATTGTTGTGGCCGTCCTCAC
AGCCTTGGTCAGGATTGGTCTATTTGCGGCTGGGGCGGTGGCGGCTGGGATTTGGGTCATACCGCCTTTATTGCGACTGT
TAGCCCGCACAGAAAGCCGAGAACTATTCTTATTAGGTGTGGTGGCGCTGTGTTTGGGTATTGCCCTGCTGACAGAATCT
TTAGGCCTGTCAATTGAAATGGGGGCTTTCGTCGCTGGGTTAATGATATCTGAGGTGGAGTATGCCGACCAAACCCTGAC
CTATGTAGAACCCCTACGAGATATTTTTGCTAGTTTATTCTTTGCAGCGATTGGGATGCTCATTGACCCAGTGTTTTTGT
TGCAGAACATAGAACTAATTCTGGGGTTGGTAGCTTTAGTTTTCTTGGGCAAGTTCTTGATTATTACTCCCTTGGTCAAA
CTATTCCGCTACCCATTAAAAACAGCCTTAATCGCTGGTTTGGGATTGGCGCAGATTGGGGAGTTTTCCTTTGTGTTAGC
CAGTGAGGGACAGGCACTGGGGTTGGTTTCCCGACGCGTATATTTACTGATATTGGGGACTACAGCTGTAACACTCATGC
TTACCCCATTTGTGTTACGTGTACTGCCAGCAGTATTTAACTTTGCCGAATCCATACCTTGGCTCAAACCCTACATAGCT
GGAGAAGGTCAAGCATTAGATATATCAGAAGACCTACCATTTCAAGATCATGTAGTAGTGTGCGGTTATGGGCGAGTAGG
TAAGAATTTGGTGAAGTTGTTGCAGCAACACAATATGCCTGTAGTCGTTATCGACCAATCAGAAAGCCGGATTCAACAGT
TACGAGACGCGGAAATACCTTATGTATACGGTAATTGCGTCAGCCTCCACGTTCTAGAAACAGCAGGGGTAAGTCATGCC
AAAGGTATGGCGATCGCTCTTCCTGACCCTATGAGTACCCGTTTGTGTGTGAAACGCGCCCTGGAACTCTGTCCTGAACT
AGATTTGGTGGTTCGCGCCACCCAGGACAAAAACATTGAGTTGCTGTATCAACTGGGAGCGAGGGAAGTCGTGCAACCAG
AGTTTGAAGCCAGTATCGAAATGGCGACTCACTTATTAACCGATGTAGGCTGGACATCAGGTTTATTACAACAAGAAATG
CAGCAAATCCGCAGCGATCATTACTTAGATTTTCGCCCAGAACGGAACGCTGATGAAGTTTCCCGCCACTTACAGCAAGC
TACTCAAGATTTAAATCGCCGTTGGTATGCTCTACCAGCCGATTCTCCCCTAATTGGGATGAATTTAGAAGAAGCGGATA
TGCGCTATTTAACAGGCGTAAGCTTAATGGCAATCCGCCGCGCCAACGGTGAAGAAATCGATTATCCCAGCAATCAAACC
AAATTAGCAGCAGGCGATCGCTTGTTGATTGTCGGCGCTAAAGAAGAACTAGCAGCATTAGAGGAATTTGCCCAAGGTAA
GGTAGGTGTTCCAGGGCAAAACAGCGCTTGTCAGTGGGTAGCCGTCGATGCTAACTCCGCCGTTTTGGGTAAAACCCTCA
AGGATTTGGCACTGGATATACAAAGCGGTATCAAAGTACAAGCGATACGCCGAGACGGTAAATTTATTCGCTCTCCCAAT
GACAACATTGACCTCCGGACTGGCGACCAAGTTCTACTATGCGGAAGCCTCCCAAGTCTGAATCAAATACAGCCTCTATT
TGCCGTAGTCAACGAAATACCTCTAGCGATTCCCATAGTAAAAGCCAAGGAGACGGAAGTAGTTAAAGAGATGCGGGGTT
AA

Upstream 100 bases:

>100_bases
AATACATAAATTTTGTTGTCCTGGTACAGTTCCCTTCCCCCAGATAGTTAAAAATTTGTATTCTAAAGTTAATAGGTCTT
AATGGTTCTTAGAAAAACTG

Downstream 100 bases:

>100_bases
CAATTCAAAATTCAAAATTCAAAATTCAAAATACCCTGCGGGTTCGCGTAGCGTTCTCGTTCGCGTTAGCGTCTCCGAAG
GAGAAGAGTAGGCTACGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 773; Mature: 773

Protein sequence:

>773_residues
MQEDFRLIVDLVSVLAVAACGGLFAALLKQPVLLGYLIGGMVVGPAGLGLIKEVIQVETLAQFGVAFLLFALGVEFSFAE
LKKVKAIALGGGGLQIALTILTTVLVCGLTGAWGALPAKGVFLGSILSLSSTAVVLKCLMERNETETPHGQVMLGILVVQ
DLALGLMLAVLPALHEPGEVIVVAVLTALVRIGLFAAGAVAAGIWVIPPLLRLLARTESRELFLLGVVALCLGIALLTES
LGLSIEMGAFVAGLMISEVEYADQTLTYVEPLRDIFASLFFAAIGMLIDPVFLLQNIELILGLVALVFLGKFLIITPLVK
LFRYPLKTALIAGLGLAQIGEFSFVLASEGQALGLVSRRVYLLILGTTAVTLMLTPFVLRVLPAVFNFAESIPWLKPYIA
GEGQALDISEDLPFQDHVVVCGYGRVGKNLVKLLQQHNMPVVVIDQSESRIQQLRDAEIPYVYGNCVSLHVLETAGVSHA
KGMAIALPDPMSTRLCVKRALELCPELDLVVRATQDKNIELLYQLGAREVVQPEFEASIEMATHLLTDVGWTSGLLQQEM
QQIRSDHYLDFRPERNADEVSRHLQQATQDLNRRWYALPADSPLIGMNLEEADMRYLTGVSLMAIRRANGEEIDYPSNQT
KLAAGDRLLIVGAKEELAALEEFAQGKVGVPGQNSACQWVAVDANSAVLGKTLKDLALDIQSGIKVQAIRRDGKFIRSPN
DNIDLRTGDQVLLCGSLPSLNQIQPLFAVVNEIPLAIPIVKAKETEVVKEMRG

Sequences:

>Translated_773_residues
MQEDFRLIVDLVSVLAVAACGGLFAALLKQPVLLGYLIGGMVVGPAGLGLIKEVIQVETLAQFGVAFLLFALGVEFSFAE
LKKVKAIALGGGGLQIALTILTTVLVCGLTGAWGALPAKGVFLGSILSLSSTAVVLKCLMERNETETPHGQVMLGILVVQ
DLALGLMLAVLPALHEPGEVIVVAVLTALVRIGLFAAGAVAAGIWVIPPLLRLLARTESRELFLLGVVALCLGIALLTES
LGLSIEMGAFVAGLMISEVEYADQTLTYVEPLRDIFASLFFAAIGMLIDPVFLLQNIELILGLVALVFLGKFLIITPLVK
LFRYPLKTALIAGLGLAQIGEFSFVLASEGQALGLVSRRVYLLILGTTAVTLMLTPFVLRVLPAVFNFAESIPWLKPYIA
GEGQALDISEDLPFQDHVVVCGYGRVGKNLVKLLQQHNMPVVVIDQSESRIQQLRDAEIPYVYGNCVSLHVLETAGVSHA
KGMAIALPDPMSTRLCVKRALELCPELDLVVRATQDKNIELLYQLGAREVVQPEFEASIEMATHLLTDVGWTSGLLQQEM
QQIRSDHYLDFRPERNADEVSRHLQQATQDLNRRWYALPADSPLIGMNLEEADMRYLTGVSLMAIRRANGEEIDYPSNQT
KLAAGDRLLIVGAKEELAALEEFAQGKVGVPGQNSACQWVAVDANSAVLGKTLKDLALDIQSGIKVQAIRRDGKFIRSPN
DNIDLRTGDQVLLCGSLPSLNQIQPLFAVVNEIPLAIPIVKAKETEVVKEMRG
>Mature_773_residues
MQEDFRLIVDLVSVLAVAACGGLFAALLKQPVLLGYLIGGMVVGPAGLGLIKEVIQVETLAQFGVAFLLFALGVEFSFAE
LKKVKAIALGGGGLQIALTILTTVLVCGLTGAWGALPAKGVFLGSILSLSSTAVVLKCLMERNETETPHGQVMLGILVVQ
DLALGLMLAVLPALHEPGEVIVVAVLTALVRIGLFAAGAVAAGIWVIPPLLRLLARTESRELFLLGVVALCLGIALLTES
LGLSIEMGAFVAGLMISEVEYADQTLTYVEPLRDIFASLFFAAIGMLIDPVFLLQNIELILGLVALVFLGKFLIITPLVK
LFRYPLKTALIAGLGLAQIGEFSFVLASEGQALGLVSRRVYLLILGTTAVTLMLTPFVLRVLPAVFNFAESIPWLKPYIA
GEGQALDISEDLPFQDHVVVCGYGRVGKNLVKLLQQHNMPVVVIDQSESRIQQLRDAEIPYVYGNCVSLHVLETAGVSHA
KGMAIALPDPMSTRLCVKRALELCPELDLVVRATQDKNIELLYQLGAREVVQPEFEASIEMATHLLTDVGWTSGLLQQEM
QQIRSDHYLDFRPERNADEVSRHLQQATQDLNRRWYALPADSPLIGMNLEEADMRYLTGVSLMAIRRANGEEIDYPSNQT
KLAAGDRLLIVGAKEELAALEEFAQGKVGVPGQNSACQWVAVDANSAVLGKTLKDLALDIQSGIKVQAIRRDGKFIRSPN
DNIDLRTGDQVLLCGSLPSLNQIQPLFAVVNEIPLAIPIVKAKETEVVKEMRG

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI157388921, Length=402, Percent_Identity=36.5671641791045, Blast_Score=199, Evalue=8e-51,
Organism=Escherichia coli, GI1786685, Length=559, Percent_Identity=32.5581395348837, Blast_Score=239, Evalue=5e-64,
Organism=Escherichia coli, GI1786232, Length=533, Percent_Identity=29.6435272045028, Blast_Score=185, Evalue=8e-48,
Organism=Escherichia coli, GI1789749, Length=569, Percent_Identity=27.0650263620387, Blast_Score=185, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153
- InterPro:   IPR004771
- InterPro:   IPR016040
- InterPro:   IPR003148 [H]

Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 83421; Mature: 83421

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEDFRLIVDLVSVLAVAACGGLFAALLKQPVLLGYLIGGMVVGPAGLGLIKEVIQVETL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AQFGVAFLLFALGVEFSFAELKKVKAIALGGGGLQIALTILTTVLVCGLTGAWGALPAKG
HHHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCH
VFLGSILSLSSTAVVLKCLMERNETETPHGQVMLGILVVQDLALGLMLAVLPALHEPGEV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
IVVAVLTALVRIGLFAAGAVAAGIWVIPPLLRLLARTESRELFLLGVVALCLGIALLTES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LGLSIEMGAFVAGLMISEVEYADQTLTYVEPLRDIFASLFFAAIGMLIDPVFLLQNIELI
HCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLVALVFLGKFLIITPLVKLFRYPLKTALIAGLGLAQIGEFSFVLASEGQALGLVSRRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEECCCCCHHHHHCEE
YLLILGTTAVTLMLTPFVLRVLPAVFNFAESIPWLKPYIAGEGQALDISEDLPFQDHVVV
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCEEE
CGYGRVGKNLVKLLQQHNMPVVVIDQSESRIQQLRDAEIPYVYGNCVSLHVLETAGVSHA
EECCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCEEECCEEEEEEEHHCCCCCC
KGMAIALPDPMSTRLCVKRALELCPELDLVVRATQDKNIELLYQLGAREVVQPEFEASIE
CCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCHHHCCCHHHHHHH
MATHLLTDVGWTSGLLQQEMQQIRSDHYLDFRPERNADEVSRHLQQATQDLNRRWYALPA
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCC
DSPLIGMNLEEADMRYLTGVSLMAIRRANGEEIDYPSNQTKLAAGDRLLIVGAKEELAAL
CCCEECCCCCHHHHHHHHCHHHEEHCCCCCCCCCCCCCCCEEECCCEEEEEECHHHHHHH
EEFAQGKVGVPGQNSACQWVAVDANSAVLGKTLKDLALDIQSGIKVQAIRRDGKFIRSPN
HHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCC
DNIDLRTGDQVLLCGSLPSLNQIQPLFAVVNEIPLAIPIVKAKETEVVKEMRG
CCCEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC
>Mature Secondary Structure
MQEDFRLIVDLVSVLAVAACGGLFAALLKQPVLLGYLIGGMVVGPAGLGLIKEVIQVETL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AQFGVAFLLFALGVEFSFAELKKVKAIALGGGGLQIALTILTTVLVCGLTGAWGALPAKG
HHHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCH
VFLGSILSLSSTAVVLKCLMERNETETPHGQVMLGILVVQDLALGLMLAVLPALHEPGEV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
IVVAVLTALVRIGLFAAGAVAAGIWVIPPLLRLLARTESRELFLLGVVALCLGIALLTES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LGLSIEMGAFVAGLMISEVEYADQTLTYVEPLRDIFASLFFAAIGMLIDPVFLLQNIELI
HCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLVALVFLGKFLIITPLVKLFRYPLKTALIAGLGLAQIGEFSFVLASEGQALGLVSRRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEECCCCCHHHHHCEE
YLLILGTTAVTLMLTPFVLRVLPAVFNFAESIPWLKPYIAGEGQALDISEDLPFQDHVVV
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCEEE
CGYGRVGKNLVKLLQQHNMPVVVIDQSESRIQQLRDAEIPYVYGNCVSLHVLETAGVSHA
EECCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCEEECCEEEEEEEHHCCCCCC
KGMAIALPDPMSTRLCVKRALELCPELDLVVRATQDKNIELLYQLGAREVVQPEFEASIE
CCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCHHHCCCHHHHHHH
MATHLLTDVGWTSGLLQQEMQQIRSDHYLDFRPERNADEVSRHLQQATQDLNRRWYALPA
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCC
DSPLIGMNLEEADMRYLTGVSLMAIRRANGEEIDYPSNQTKLAAGDRLLIVGAKEELAAL
CCCEECCCCCHHHHHHHHCHHHEEHCCCCCCCCCCCCCCCEEECCCEEEEEECHHHHHHH
EEFAQGKVGVPGQNSACQWVAVDANSAVLGKTLKDLALDIQSGIKVQAIRRDGKFIRSPN
HHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCC
DNIDLRTGDQVLLCGSLPSLNQIQPLFAVVNEIPLAIPIVKAKETEVVKEMRG
CCCEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 7721718 [H]