| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229320
Identifier: 17229320
GI number: 17229320
Start: 2193881
End: 2194144
Strand: Direct
Name: 17229320
Synonym: asr1828
Alternate gene names: NA
Gene position: 2193881-2194144 (Clockwise)
Preceding gene: 17229319
Following gene: 17229324
Centisome position: 34.21
GC content: 41.67
Gene sequence:
>264_bases ATGCACCAACAAGATACTTCATCCTTTTATGTGCGCGTCCCTGCAAGAGTTTTAGGATGTCTACGTGCTGGTGAGATTAC TATTATTCTATTTCCTGGGCATGGGTTAGTGCTAACAGAACCAATCGAAACCTATCTCATTCCTGAAAGCTTGAGAATGC CCAATAGTGAGTTTTATGTGTTGTTCAAACATCCAGGGCGAGAGATGATCCGAATCTTACGACACAACGAATTTTGCCCA GAAATCGATGCAAACAATAAGTGA
Upstream 100 bases:
>100_bases GGACAGGTAGTAAGCTGAAAATAGTGTTAAACCCAGCAACCTGTCCTACTGATGAAGTGCCATTAACTAAATCTTTGGTT GGGAGTGGTATATAAAGTGT
Downstream 100 bases:
>100_bases AGTTTAACTTATTTCAAGCATTGGAGAATCGACATCTAAAAGCCAATTCTCATCAATAAATTCTAGATTTTCATCATAAA CAAGAACTAATTCACCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MHQQDTSSFYVRVPARVLGCLRAGEITIILFPGHGLVLTEPIETYLIPESLRMPNSEFYVLFKHPGREMIRILRHNEFCP EIDANNK
Sequences:
>Translated_87_residues MHQQDTSSFYVRVPARVLGCLRAGEITIILFPGHGLVLTEPIETYLIPESLRMPNSEFYVLFKHPGREMIRILRHNEFCP EIDANNK >Mature_87_residues MHQQDTSSFYVRVPARVLGCLRAGEITIILFPGHGLVLTEPIETYLIPESLRMPNSEFYVLFKHPGREMIRILRHNEFCP EIDANNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10068; Mature: 10068
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQQDTSSFYVRVPARVLGCLRAGEITIILFPGHGLVLTEPIETYLIPESLRMPNSEFYV CCCCCCCEEEEEEHHHHHHHHCCCCEEEEEECCCCEEEECCCCEEECCHHHCCCCCCEEE LFKHPGREMIRILRHNEFCPEIDANNK EEECCCHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MHQQDTSSFYVRVPARVLGCLRAGEITIILFPGHGLVLTEPIETYLIPESLRMPNSEFYV CCCCCCCEEEEEEHHHHHHHHCCCCEEEEEECCCCEEEECCCCEEECCHHHCCCCCCEEE LFKHPGREMIRILRHNEFCPEIDANNK EEECCCHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA