| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229253
Identifier: 17229253
GI number: 17229253
Start: 2116428
End: 2117180
Strand: Reverse
Name: 17229253
Synonym: all1761
Alternate gene names: NA
Gene position: 2117180-2116428 (Counterclockwise)
Preceding gene: 17229254
Following gene: 17229252
Centisome position: 33.01
GC content: 41.17
Gene sequence:
>753_bases ATGAGTACCAATAATGAAAGTTCCACTATCCTAAAAAAAGAGAATAAGGGCTTGGGAATTGACCGCCTAAAGCAGGACTT AAAGAATGACCTAATTGCTGGCTTGTTAGTAGTAATTCCCCTGGCAACCACTATCTGGTTAACAATTACCATTGCTAATT GGGTAATTGACTTTCTCACTCAAGTGCCTAAACAACTTAACCCTTTTGATGGATTACATCCCATAGTAGTAAATATACTT AATTTTGCAGTAGGGCTAGCTGTACCTCTACTAAGTATTTTGATTATTGGGTTAATGGCTAGGAATATTGCAGGAAGATG GTTGTTGGATTTTGGTGAACGATTATTACAGGCAATTCCTTTAGCTGGGCAGGTGTATAAAACCCTCAAGCAGCTTTTGG AAACACTACTAAAAGACTCCAATGGGAAATTTCGGAGAGTCATTTTAATAGAATATCCCCGTCGGGGAATATGGGCGATC GCCTTTGTTACAGGTGTGATTAGTAGTGAAATTCAATCTCAAATGCCTCGTCCAATGTTGAGTGTGTTTATTCCCACCAC ACCAAACCCGACTACAGGCTGGTACGCTGTAGTCCCAGAAGACGAAGTAGTTAACCTCTCCATGTCCGTAGAAGATGCTT TCAAAGTTGTAGTCTCCGGCGGCATTGTTGCACCGAATCCCTGTCTACCCGACCTAGACTTAATCCAAGAGCATAAAATA GAGAAATCCCTGCAAGAGATGAAGCAGATATAG
Upstream 100 bases:
>100_bases GGAAATAGCTTGGCTACAATTCCAATACTTGTCTTTGAGACTAAGGTTTGGAGTACAAAGGCTACACGTTATATCTGATT AATTAGACAAATTTACTGGA
Downstream 100 bases:
>100_bases AACAAGAGGGATAGGAAAGAAAATTCTGACTCTATTACTGTTACCGGCAACTCAGCACTTACCGCCAAATAAATCTAAAA AAATCCGGTAACTTCGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MSTNNESSTILKKENKGLGIDRLKQDLKNDLIAGLLVVIPLATTIWLTITIANWVIDFLTQVPKQLNPFDGLHPIVVNIL NFAVGLAVPLLSILIIGLMARNIAGRWLLDFGERLLQAIPLAGQVYKTLKQLLETLLKDSNGKFRRVILIEYPRRGIWAI AFVTGVISSEIQSQMPRPMLSVFIPTTPNPTTGWYAVVPEDEVVNLSMSVEDAFKVVVSGGIVAPNPCLPDLDLIQEHKI EKSLQEMKQI
Sequences:
>Translated_250_residues MSTNNESSTILKKENKGLGIDRLKQDLKNDLIAGLLVVIPLATTIWLTITIANWVIDFLTQVPKQLNPFDGLHPIVVNIL NFAVGLAVPLLSILIIGLMARNIAGRWLLDFGERLLQAIPLAGQVYKTLKQLLETLLKDSNGKFRRVILIEYPRRGIWAI AFVTGVISSEIQSQMPRPMLSVFIPTTPNPTTGWYAVVPEDEVVNLSMSVEDAFKVVVSGGIVAPNPCLPDLDLIQEHKI EKSLQEMKQI >Mature_249_residues STNNESSTILKKENKGLGIDRLKQDLKNDLIAGLLVVIPLATTIWLTITIANWVIDFLTQVPKQLNPFDGLHPIVVNILN FAVGLAVPLLSILIIGLMARNIAGRWLLDFGERLLQAIPLAGQVYKTLKQLLETLLKDSNGKFRRVILIEYPRRGIWAIA FVTGVISSEIQSQMPRPMLSVFIPTTPNPTTGWYAVVPEDEVVNLSMSVEDAFKVVVSGGIVAPNPCLPDLDLIQEHKIE KSLQEMKQI
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27725; Mature: 27594
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNNESSTILKKENKGLGIDRLKQDLKNDLIAGLLVVIPLATTIWLTITIANWVIDFLT CCCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVPKQLNPFDGLHPIVVNILNFAVGLAVPLLSILIIGLMARNIAGRWLLDFGERLLQAIP HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LAGQVYKTLKQLLETLLKDSNGKFRRVILIEYPRRGIWAIAFVTGVISSEIQSQMPRPML CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC SVFIPTTPNPTTGWYAVVPEDEVVNLSMSVEDAFKVVVSGGIVAPNPCLPDLDLIQEHKI EEEECCCCCCCCCEEEECCCCCEEEEEECHHHHHHHHHCCCEECCCCCCCCHHHHHHHHH EKSLQEMKQI HHHHHHHHCC >Mature Secondary Structure STNNESSTILKKENKGLGIDRLKQDLKNDLIAGLLVVIPLATTIWLTITIANWVIDFLT CCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVPKQLNPFDGLHPIVVNILNFAVGLAVPLLSILIIGLMARNIAGRWLLDFGERLLQAIP HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LAGQVYKTLKQLLETLLKDSNGKFRRVILIEYPRRGIWAIAFVTGVISSEIQSQMPRPML CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC SVFIPTTPNPTTGWYAVVPEDEVVNLSMSVEDAFKVVVSGGIVAPNPCLPDLDLIQEHKI EEEECCCCCCCCCEEEECCCCCEEEEEECHHHHHHHHHCCCEECCCCCCCCHHHHHHHHH EKSLQEMKQI HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA