Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is yqhQ [H]

Identifier: 170757760

GI number: 170757760

Start: 174548

End: 175465

Strand: Direct

Name: yqhQ [H]

Synonym: CLD_0649

Alternate gene names: 170757760

Gene position: 174548-175465 (Clockwise)

Preceding gene: 170755962

Following gene: 170756524

Centisome position: 4.41

GC content: 27.56

Gene sequence:

>918_bases
GTGGGGAGAAGTACTAACGTTGGGGGACAAGCAGTTTTAGAAGGGGTAATGATGAGAGGAAAAAATGGTATAGCAACGGC
AGTTAGAAAAACAAATGGAGAAGTAATTGTAAATAAAGAAAGCTATACACCTTACACTAAAAAAAGTTTTTTCTTTTCTC
TACCAATAATAAGAGGCTTTGTATCTCTTATTGAATCTTTAGTAATAGGCATACAAACTCTAAATTATTCTGCATCATTT
TTTGAAGAACAGGTTGAAGAGTCTAAATTTGATAAATGGTTTAATAGAACTTTTAAGGATAAGGCAGATAATATTTTAAT
TGGGATAACATTACTCATATCTTTTATTATATCTGCAGTAGTATTTTTTATTTTTCCAACCTTTATAGCTAATTTTTTTA
AAAAAATATATATACAAAATACCTTATTATTAAATATAATAGAAGGAATAATAAGAATAGCTATATTTTTATTATATATT
TTATTAATAAGCAATATGGAAGATATAAAAAGGGTATTTCAGTACCATGGGGCAGAACATAAGACTATATTTTGTTATGA
AAATCATATGGATCTAATACCTGAAAATGCTATAAAATTTACAAGATTTCATCCAAGATGTGGAACGAATTTTTTGTTTT
TAGTTATGATTGTAAGCATACTTTTATTTTCGCTTACAGGATGGAATAATATATGGCAAAGAATTTTATATAGAATAATA
TTATTACCTGTAGTTTCAGGGGTAACCTATGAAATTATAAAATGGTTAGGTAAAAGCAATAGTAATTTTGCAAAAATTAT
AGCATATCCAGGGCTTATGTTACAAAAACTAACAACTAAAGAACCTGACTTAAGGCAATTGGAAGTAGCTATAATGGCTT
TAAAAGCAGCAGAAGGAATTGAAAGTTCAATGGAGTGA

Upstream 100 bases:

>100_bases
AAGAAATCTGACCCAGTAGTATTAATAGGGGCACAAGAGTCTTATGAAGCTAGATGTAGGAAGTGTCATCGTGTTCCAAG
ATAAGTAATGAGGTGATTAA

Downstream 100 bases:

>100_bases
TGTTAATTTGATATTAAAAGATTTACTAATAGAAGGATATGGTGTTTTAAAAAAAGCATCTATAGGTAGCTATCAAATAG
ATGCTCAACTTTTATTAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MGRSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEVIVNKESYTPYTKKSFFFSLPIIRGFVSLIESLVIGIQTLNYSASF
FEEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAVVFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYI
LLISNMEDIKRVFQYHGAEHKTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRII
LLPVVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLRQLEVAIMALKAAEGIESSME

Sequences:

>Translated_305_residues
MGRSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEVIVNKESYTPYTKKSFFFSLPIIRGFVSLIESLVIGIQTLNYSASF
FEEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAVVFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYI
LLISNMEDIKRVFQYHGAEHKTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRII
LLPVVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLRQLEVAIMALKAAEGIESSME
>Mature_304_residues
GRSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEVIVNKESYTPYTKKSFFFSLPIIRGFVSLIESLVIGIQTLNYSASFF
EEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAVVFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYIL
LISNMEDIKRVFQYHGAEHKTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRIIL
LPVVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLRQLEVAIMALKAAEGIESSME

Specific function: Unknown

COG id: COG3872

COG function: function code R; Predicted metal-dependent enzyme

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010787
- ProDom:   PD131510 [H]

Pfam domain/function: PF07136 DUF1385 [H]

EC number: NA

Molecular weight: Translated: 34917; Mature: 34786

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEVIVNKESYTPYTKKSFFFSLPIIRGF
CCCCCCCCHHHHHHHHHHCCCCCHHHHHEECCCCEEEECCCCCCCCHHHHHHHHHHHHHH
VSLIESLVIGIQTLNYSASFFEEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH
VFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYILLISNMEDIKRVFQYHGAEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
KTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRII
CEEEEECCCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LLPVVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLRQLEVAIMALKAAEGI
HHHHHCCHHHHHHHHHCCCCCCCEEHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ESSME
HHCCC
>Mature Secondary Structure 
GRSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEVIVNKESYTPYTKKSFFFSLPIIRGF
CCCCCCCHHHHHHHHHHCCCCCHHHHHEECCCCEEEECCCCCCCCHHHHHHHHHHHHHH
VSLIESLVIGIQTLNYSASFFEEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH
VFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYILLISNMEDIKRVFQYHGAEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
KTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRII
CEEEEECCCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LLPVVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLRQLEVAIMALKAAEGI
HHHHHCCHHHHHHHHHCCCCCCCEEHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ESSME
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]