| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yqhQ [H]
Identifier: 170757760
GI number: 170757760
Start: 174548
End: 175465
Strand: Direct
Name: yqhQ [H]
Synonym: CLD_0649
Alternate gene names: 170757760
Gene position: 174548-175465 (Clockwise)
Preceding gene: 170755962
Following gene: 170756524
Centisome position: 4.41
GC content: 27.56
Gene sequence:
>918_bases GTGGGGAGAAGTACTAACGTTGGGGGACAAGCAGTTTTAGAAGGGGTAATGATGAGAGGAAAAAATGGTATAGCAACGGC AGTTAGAAAAACAAATGGAGAAGTAATTGTAAATAAAGAAAGCTATACACCTTACACTAAAAAAAGTTTTTTCTTTTCTC TACCAATAATAAGAGGCTTTGTATCTCTTATTGAATCTTTAGTAATAGGCATACAAACTCTAAATTATTCTGCATCATTT TTTGAAGAACAGGTTGAAGAGTCTAAATTTGATAAATGGTTTAATAGAACTTTTAAGGATAAGGCAGATAATATTTTAAT TGGGATAACATTACTCATATCTTTTATTATATCTGCAGTAGTATTTTTTATTTTTCCAACCTTTATAGCTAATTTTTTTA AAAAAATATATATACAAAATACCTTATTATTAAATATAATAGAAGGAATAATAAGAATAGCTATATTTTTATTATATATT TTATTAATAAGCAATATGGAAGATATAAAAAGGGTATTTCAGTACCATGGGGCAGAACATAAGACTATATTTTGTTATGA AAATCATATGGATCTAATACCTGAAAATGCTATAAAATTTACAAGATTTCATCCAAGATGTGGAACGAATTTTTTGTTTT TAGTTATGATTGTAAGCATACTTTTATTTTCGCTTACAGGATGGAATAATATATGGCAAAGAATTTTATATAGAATAATA TTATTACCTGTAGTTTCAGGGGTAACCTATGAAATTATAAAATGGTTAGGTAAAAGCAATAGTAATTTTGCAAAAATTAT AGCATATCCAGGGCTTATGTTACAAAAACTAACAACTAAAGAACCTGACTTAAGGCAATTGGAAGTAGCTATAATGGCTT TAAAAGCAGCAGAAGGAATTGAAAGTTCAATGGAGTGA
Upstream 100 bases:
>100_bases AAGAAATCTGACCCAGTAGTATTAATAGGGGCACAAGAGTCTTATGAAGCTAGATGTAGGAAGTGTCATCGTGTTCCAAG ATAAGTAATGAGGTGATTAA
Downstream 100 bases:
>100_bases TGTTAATTTGATATTAAAAGATTTACTAATAGAAGGATATGGTGTTTTAAAAAAAGCATCTATAGGTAGCTATCAAATAG ATGCTCAACTTTTATTAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MGRSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEVIVNKESYTPYTKKSFFFSLPIIRGFVSLIESLVIGIQTLNYSASF FEEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAVVFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYI LLISNMEDIKRVFQYHGAEHKTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRII LLPVVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLRQLEVAIMALKAAEGIESSME
Sequences:
>Translated_305_residues MGRSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEVIVNKESYTPYTKKSFFFSLPIIRGFVSLIESLVIGIQTLNYSASF FEEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAVVFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYI LLISNMEDIKRVFQYHGAEHKTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRII LLPVVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLRQLEVAIMALKAAEGIESSME >Mature_304_residues GRSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEVIVNKESYTPYTKKSFFFSLPIIRGFVSLIESLVIGIQTLNYSASFF EEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAVVFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYIL LISNMEDIKRVFQYHGAEHKTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRIIL LPVVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLRQLEVAIMALKAAEGIESSME
Specific function: Unknown
COG id: COG3872
COG function: function code R; Predicted metal-dependent enzyme
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010787 - ProDom: PD131510 [H]
Pfam domain/function: PF07136 DUF1385 [H]
EC number: NA
Molecular weight: Translated: 34917; Mature: 34786
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEVIVNKESYTPYTKKSFFFSLPIIRGF CCCCCCCCHHHHHHHHHHCCCCCHHHHHEECCCCEEEECCCCCCCCHHHHHHHHHHHHHH VSLIESLVIGIQTLNYSASFFEEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH VFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYILLISNMEDIKRVFQYHGAEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC KTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRII CEEEEECCCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LLPVVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLRQLEVAIMALKAAEGI HHHHHCCHHHHHHHHHCCCCCCCEEHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ESSME HHCCC >Mature Secondary Structure GRSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEVIVNKESYTPYTKKSFFFSLPIIRGF CCCCCCCHHHHHHHHHHCCCCCHHHHHEECCCCEEEECCCCCCCCHHHHHHHHHHHHHH VSLIESLVIGIQTLNYSASFFEEQVEESKFDKWFNRTFKDKADNILIGITLLISFIISAV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH VFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYILLISNMEDIKRVFQYHGAEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC KTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILLFSLTGWNNIWQRILYRII CEEEEECCCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LLPVVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKEPDLRQLEVAIMALKAAEGI HHHHHCCHHHHHHHHHCCCCCCCEEHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ESSME HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]