Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170757699

Identifier: 170757699

GI number: 170757699

Start: 2227945

End: 2229000

Strand: Reverse

Name: 170757699

Synonym: CLD_2545

Alternate gene names: NA

Gene position: 2229000-2227945 (Counterclockwise)

Preceding gene: 170756900

Following gene: 170754841

Centisome position: 56.31

GC content: 25.57

Gene sequence:

>1056_bases
ATGAGTAATTTTTTAGATATGGATTCAAATAGTATTGTTCTTTCAGAATTTTATGAGAATGAAGTAGCCGGTAAGTATAA
TTATAATGCTGTATATCAAAGAGAAAAAATTTGGAACATTGAAAAGAAAAGATTCCTTATAGATACAATACTTAAAAATT
ATCCTATACCACCGATATTTTTAAGAATGTTTATAGATGAAAATACTGGTGCTACAAAATATGATGTGATTGACGGAAAA
CAAAGATTAACTACAATAATAGATTTTATAAATGGTAAAATAAATTTGCCAGATGATTTTAGTATAGGACCATTTGGTAA
TGAAAATCTAGACGGGCTTTACTTTAAAGAACTAGATGAATTTGCTGATTATAAAAAGAGATTTTGGAAATATAAAATTC
CAATTATATATATTGATTCGAAAGATGATGAAGTTATTAGAAATGTATTTGATAGATTAAATAGAAACGGGGAACCACTA
ACTTTTCAAGAATTACGTAATGCTAAATATTGTGAAACAGATTTTTATGAGCTTGTTGAAAAATTATCTGGTATAAATTT
TTGGAAAACACGTTTAAGTAACCTTGAGATATCAAGAATGGAAGATAAAGAATTTATTTCAGAATTATTGTTCGTAGTGT
TGGAGGATAATATTATTTCATATACCAGAAAAGAATTAGATGGATTATATGAAAAATGGACTAACAAAGAATTCAATAAA
AATGATATTATTGAAAAATTTAGAACAATAACAGAATTTATTGAACTACTTGATATAGATTATGATAAATATAAAATTAC
TGGTGTAAGTCATTTGTATGGTATTTGGGTATTTTCATACATTTGTGTATTACAAGATATAAGAGCAATTGATATAAAAG
GAATGATTGATAAGTTTTATTCAAAGCTTAGGAATAAAGATACATCGCAAGAGTTTATAGAGTATAGTAAAAGTATGAAT
TCTGCAACCAAAAGTAAGTCAAGCCGTAGAAAAAGAGTAAATGCGTTACTAGAATATATGTCGCATAATGGTATCAATAT
AAAAAATTTACTCTGA

Upstream 100 bases:

>100_bases
ATCATAAATCCTAAAATCCCTAGTTCACTTAATGCTGTTGTATCTAGTATTTTTAGTAATTATGTTTCTTATTCAAGTTC
AGATATTTTAGGAGGTTTAT

Downstream 100 bases:

>100_bases
TTTTTATAAATAGGTAGTTAATCATATAATTTAATTAGATTTTTGAAAATATGAGAAAATTTGTTCAATTTTATAATTTA
ATGAAATCTGTATATAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSNFLDMDSNSIVLSEFYENEVAGKYNYNAVYQREKIWNIEKKRFLIDTILKNYPIPPIFLRMFIDENTGATKYDVIDGK
QRLTTIIDFINGKINLPDDFSIGPFGNENLDGLYFKELDEFADYKKRFWKYKIPIIYIDSKDDEVIRNVFDRLNRNGEPL
TFQELRNAKYCETDFYELVEKLSGINFWKTRLSNLEISRMEDKEFISELLFVVLEDNIISYTRKELDGLYEKWTNKEFNK
NDIIEKFRTITEFIELLDIDYDKYKITGVSHLYGIWVFSYICVLQDIRAIDIKGMIDKFYSKLRNKDTSQEFIEYSKSMN
SATKSKSSRRKRVNALLEYMSHNGINIKNLL

Sequences:

>Translated_351_residues
MSNFLDMDSNSIVLSEFYENEVAGKYNYNAVYQREKIWNIEKKRFLIDTILKNYPIPPIFLRMFIDENTGATKYDVIDGK
QRLTTIIDFINGKINLPDDFSIGPFGNENLDGLYFKELDEFADYKKRFWKYKIPIIYIDSKDDEVIRNVFDRLNRNGEPL
TFQELRNAKYCETDFYELVEKLSGINFWKTRLSNLEISRMEDKEFISELLFVVLEDNIISYTRKELDGLYEKWTNKEFNK
NDIIEKFRTITEFIELLDIDYDKYKITGVSHLYGIWVFSYICVLQDIRAIDIKGMIDKFYSKLRNKDTSQEFIEYSKSMN
SATKSKSSRRKRVNALLEYMSHNGINIKNLL
>Mature_350_residues
SNFLDMDSNSIVLSEFYENEVAGKYNYNAVYQREKIWNIEKKRFLIDTILKNYPIPPIFLRMFIDENTGATKYDVIDGKQ
RLTTIIDFINGKINLPDDFSIGPFGNENLDGLYFKELDEFADYKKRFWKYKIPIIYIDSKDDEVIRNVFDRLNRNGEPLT
FQELRNAKYCETDFYELVEKLSGINFWKTRLSNLEISRMEDKEFISELLFVVLEDNIISYTRKELDGLYEKWTNKEFNKN
DIIEKFRTITEFIELLDIDYDKYKITGVSHLYGIWVFSYICVLQDIRAIDIKGMIDKFYSKLRNKDTSQEFIEYSKSMNS
ATKSKSSRRKRVNALLEYMSHNGINIKNLL

Specific function: Unknown

COG id: COG1479

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41821; Mature: 41690

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNFLDMDSNSIVLSEFYENEVAGKYNYNAVYQREKIWNIEKKRFLIDTILKNYPIPPIF
CCCCCCCCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHH
LRMFIDENTGATKYDVIDGKQRLTTIIDFINGKINLPDDFSIGPFGNENLDGLYFKELDE
HHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
FADYKKRFWKYKIPIIYIDSKDDEVIRNVFDRLNRNGEPLTFQELRNAKYCETDFYELVE
HHHHHHHHHEEECCEEEECCCCHHHHHHHHHHHCCCCCCEEHHHHCCCCCCCHHHHHHHH
KLSGINFWKTRLSNLEISRMEDKEFISELLFVVLEDNIISYTRKELDGLYEKWTNKEFNK
HHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
NDIIEKFRTITEFIELLDIDYDKYKITGVSHLYGIWVFSYICVLQDIRAIDIKGMIDKFY
HHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKLRNKDTSQEFIEYSKSMNSATKSKSSRRKRVNALLEYMSHNGINIKNLL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC
>Mature Secondary Structure 
SNFLDMDSNSIVLSEFYENEVAGKYNYNAVYQREKIWNIEKKRFLIDTILKNYPIPPIF
CCCCCCCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHH
LRMFIDENTGATKYDVIDGKQRLTTIIDFINGKINLPDDFSIGPFGNENLDGLYFKELDE
HHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
FADYKKRFWKYKIPIIYIDSKDDEVIRNVFDRLNRNGEPLTFQELRNAKYCETDFYELVE
HHHHHHHHHEEECCEEEECCCCHHHHHHHHHHHCCCCCCEEHHHHCCCCCCCHHHHHHHH
KLSGINFWKTRLSNLEISRMEDKEFISELLFVVLEDNIISYTRKELDGLYEKWTNKEFNK
HHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
NDIIEKFRTITEFIELLDIDYDKYKITGVSHLYGIWVFSYICVLQDIRAIDIKGMIDKFY
HHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKLRNKDTSQEFIEYSKSMNSATKSKSSRRKRVNALLEYMSHNGINIKNLL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA