| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756900
Identifier: 170756900
GI number: 170756900
Start: 2228993
End: 2229958
Strand: Reverse
Name: 170756900
Synonym: CLD_2544
Alternate gene names: NA
Gene position: 2229958-2228993 (Counterclockwise)
Preceding gene: 170757767
Following gene: 170757699
Centisome position: 56.34
GC content: 27.95
Gene sequence:
>966_bases ATGAATGAAATAGATGTGTTGAATTTATTTAAAAATGGGGACAAGGTACCATGGTTAAGTGATAATGAACCGGGTTTTTT GTCATATAAACGATGTCCTAATCTATGGAATTTGGGGGCAAGACCAAGTAATCAAGATTCCTCAGAAGCGTCGGATATTG TTGAAAACATTATCACTTGTGCCAATATGTATGCATATGCTAATAGAAAATCAAATCAAGTGAATGAGGAGAATATTTAT ATTAAGGCCTATAAAGAACTTGCCATATATCTTAAATACCTATTTATATTTTATAACGATAAATTAACGGATAAATATAT TAAAGAGAAAATATCAAATTGGGGTTGGTATAATTTATTCCAATGTATTAAAGATAATCCCAATAAATTTGAAAACATTA CAATAATTACATATAATTACGATGTATGGTTAGAAAGAGTTCTAACCATAATGGGTATTAAATATAATATTGTGGGTTTA ACAAATTATGAGGATTCAATTGTAGATATTATAAAACCTCATGGTTCAATTAGTTTTAGATCTAAAAGAAGTTTAGAAAA CAGTGCATTTAAAATTAATTATAATAGAGATATTATTGGAGCAGAATTAGATGAGTTAACAGTAGATTGTGATAATTTAA AAATTCATTCGCATATTAATGCATTGATACCTCCAGCAGGTGACTCGTCAAGATTTTCTTCAAGCTGGTCAAATAAACTT CATAAAGTAGCAAAGGAAAGTGCAAATAAACTAATTCCTAATGATGAAGTTATACTTTGTGGGCTATCATATTGGCATGT TGATAGATTAGAAATTGATGAAATATTACTATCACTTGATTCGGAAGTTAATTTCAAAATCATAAATCCTAAAATCCCTA GTTCACTTAATGCTGTTGTATCTAGTATTTTTAGTAATTATGTTTCTTATTCAAGTTCAGATATTTTAGGAGGTTTATAT GAGTAA
Upstream 100 bases:
>100_bases TACTTATGTGGAATAGAAAGGACTGAGAACAATTAGTAAAAAACTTTTAATACTACTTGGTAATGGTTTTACAATTGATT TTTTGCAACAGCTGAATAAG
Downstream 100 bases:
>100_bases TTTTTTAGATATGGATTCAAATAGTATTGTTCTTTCAGAATTTTATGAGAATGAAGTAGCCGGTAAGTATAATTATAATG CTGTATATCAAAGAGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MNEIDVLNLFKNGDKVPWLSDNEPGFLSYKRCPNLWNLGARPSNQDSSEASDIVENIITCANMYAYANRKSNQVNEENIY IKAYKELAIYLKYLFIFYNDKLTDKYIKEKISNWGWYNLFQCIKDNPNKFENITIITYNYDVWLERVLTIMGIKYNIVGL TNYEDSIVDIIKPHGSISFRSKRSLENSAFKINYNRDIIGAELDELTVDCDNLKIHSHINALIPPAGDSSRFSSSWSNKL HKVAKESANKLIPNDEVILCGLSYWHVDRLEIDEILLSLDSEVNFKIINPKIPSSLNAVVSSIFSNYVSYSSSDILGGLY E
Sequences:
>Translated_321_residues MNEIDVLNLFKNGDKVPWLSDNEPGFLSYKRCPNLWNLGARPSNQDSSEASDIVENIITCANMYAYANRKSNQVNEENIY IKAYKELAIYLKYLFIFYNDKLTDKYIKEKISNWGWYNLFQCIKDNPNKFENITIITYNYDVWLERVLTIMGIKYNIVGL TNYEDSIVDIIKPHGSISFRSKRSLENSAFKINYNRDIIGAELDELTVDCDNLKIHSHINALIPPAGDSSRFSSSWSNKL HKVAKESANKLIPNDEVILCGLSYWHVDRLEIDEILLSLDSEVNFKIINPKIPSSLNAVVSSIFSNYVSYSSSDILGGLY E >Mature_321_residues MNEIDVLNLFKNGDKVPWLSDNEPGFLSYKRCPNLWNLGARPSNQDSSEASDIVENIITCANMYAYANRKSNQVNEENIY IKAYKELAIYLKYLFIFYNDKLTDKYIKEKISNWGWYNLFQCIKDNPNKFENITIITYNYDVWLERVLTIMGIKYNIVGL TNYEDSIVDIIKPHGSISFRSKRSLENSAFKINYNRDIIGAELDELTVDCDNLKIHSHINALIPPAGDSSRFSSSWSNKL HKVAKESANKLIPNDEVILCGLSYWHVDRLEIDEILLSLDSEVNFKIINPKIPSSLNAVVSSIFSNYVSYSSSDILGGLY E
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36852; Mature: 36852
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEIDVLNLFKNGDKVPWLSDNEPGFLSYKRCPNLWNLGARPSNQDSSEASDIVENIITC CCCCEEEHHHCCCCCCCCCCCCCCCEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ANMYAYANRKSNQVNEENIYIKAYKELAIYLKYLFIFYNDKLTDKYIKEKISNWGWYNLF HHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHH QCIKDNPNKFENITIITYNYDVWLERVLTIMGIKYNIVGLTNYEDSIVDIIKPHGSISFR HHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHCCCCCEEEC SKRSLENSAFKINYNRDIIGAELDELTVDCDNLKIHSHINALIPPAGDSSRFSSSWSNKL HHHCCCCCEEEEECCCCCCCCCHHHEEECCCCEEEECCCCEECCCCCCCHHHHHHHHHHH HKVAKESANKLIPNDEVILCGLSYWHVDRLEIDEILLSLDSEVNFKIINPKIPSSLNAVV HHHHHHHHHCCCCCCCEEEEECHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH SSIFSNYVSYSSSDILGGLYE HHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNEIDVLNLFKNGDKVPWLSDNEPGFLSYKRCPNLWNLGARPSNQDSSEASDIVENIITC CCCCEEEHHHCCCCCCCCCCCCCCCEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ANMYAYANRKSNQVNEENIYIKAYKELAIYLKYLFIFYNDKLTDKYIKEKISNWGWYNLF HHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHH QCIKDNPNKFENITIITYNYDVWLERVLTIMGIKYNIVGLTNYEDSIVDIIKPHGSISFR HHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHCCCCCEEEC SKRSLENSAFKINYNRDIIGAELDELTVDCDNLKIHSHINALIPPAGDSSRFSSSWSNKL HHHCCCCCEEEEECCCCCCCCCHHHEEECCCCEEEECCCCEECCCCCCCHHHHHHHHHHH HKVAKESANKLIPNDEVILCGLSYWHVDRLEIDEILLSLDSEVNFKIINPKIPSSLNAVV HHHHHHHHHCCCCCCCEEEEECHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH SSIFSNYVSYSSSDILGGLYE HHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA