| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is purA
Identifier: 170757650
GI number: 170757650
Start: 3928548
End: 3929834
Strand: Reverse
Name: purA
Synonym: CLD_0858
Alternate gene names: 170757650
Gene position: 3929834-3928548 (Counterclockwise)
Preceding gene: 170754343
Following gene: 170756592
Centisome position: 99.28
GC content: 32.01
Gene sequence:
>1287_bases ATGTCAGCTTTTATAGTATTAGGGGCCCAATGGGGCGATGAAGGTAAAGGAAAAATGACTGATTATTTAGCTGAAAATGC AGATGTAGTTGTAAGATTTCAAGGTGGTAATAACGCAGGTCATACAGTAGTTGTAGGAGAAAAGGAATATAAATTACACT TAATACCTTCAGGTATACTGTATAATGACAAACTAAATGTAATAGGAAATGGAGTAGTTTTAGATCCAAAGGCTTTATTT GAAGAAATAAACTATTTAGAATCTTTAGGAGTAGAAATAACACCAGATAGATTAATAATAAGTGATAGAGCTCATGTAAT AATGCCATATCATAGGGTATTAGATGGAATAAAAGAAAGAGCTAGAGGAAATAAAGATATAGGAACTACAGGAAAGGGTA TAGGACCAAGTTATACGGATAAGATGGAAAGAAGCGGTATAAGGGTTTGCGATCTTATACATAAAGAAGTTTTTGAAGAA AATTTGAAAGAAACTTTAGAAGTAAAAAATAAAATAATAACAGAAGTATTTGGTGGAGAGGCTTTAGACTATAATGAAAT CTATAATGAATATTTAGGATATGCAGAAAAATTAAGACCTTTTGTAAAAGATATATCTGTTATAGTTAACAAAAAAATAA AAGATGGTAAAGAAGTGTTATTTGAAGGAGCTCAAGGAACATTACTTGATATAGATTATGGAACATATCCTTATGTAACA TCTTCAAGCACAATAGCTGGAGGAGTTTGCATAGGAGCAGGTGTAGGGCCAACAGCTATAACTAATGCAGTAGGTATAGC AAAAGCATATACAACAAGAGTAGGAAAAGGTCCTTTCCCAACAGAGCTTTTAGATAGCACTGGAGACTGGGTAAGAGAAA AGGGACATGAGTTTGGAGTTACTACAGGGAGAGCAAGAAGATGTGGATGGTTAGATTTAGTTATATTAAAAACTTCAGCG AGAATATCAGGACTTACAAGTTTTGCAGTAACAAAAATTGATACATTAGCAGGATTAGATACATTAAAAGTATGCACAGG ATATAGACTAAATGGAGAAATTATAGATTATGTTCCTGCTAGCTTAGAAGATTTAGCAAAATGTGAACCAATATATGAAG AATTTGAAGGTTGGGATGATAGTATAGCTAATGCTAGATGCTATGAAGATTTACCTGAAAATGCTATAAAATATTTAAAG AAAATAGAAGATTTCACAGAAACAAAGGTATCTATAGTTTCTGTAGGTCCAAAAAGAGATCAAACTATGATGATATCAGA AATTTAA
Upstream 100 bases:
>100_bases TATATATTGTAGAAGTATTTTATTTAAAACTAAAATTACATAGCATATAAATCATATTTAAATATAATAATTTTCTTAAA ATGAAAGTGAGGAAAATAAT
Downstream 100 bases:
>100_bases TGTATATTATAGGGCATAGTAATAAAGAATATTAATATATATAAAAAATAAATATAATATCTTTAAAGAATACTAATTTA TTGATATAATAATAATTAAA
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase [H]
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSAFIVLGAQWGDEGKGKMTDYLAENADVVVRFQGGNNAGHTVVVGEKEYKLHLIPSGILYNDKLNVIGNGVVLDPKALF EEINYLESLGVEITPDRLIISDRAHVIMPYHRVLDGIKERARGNKDIGTTGKGIGPSYTDKMERSGIRVCDLIHKEVFEE NLKETLEVKNKIITEVFGGEALDYNEIYNEYLGYAEKLRPFVKDISVIVNKKIKDGKEVLFEGAQGTLLDIDYGTYPYVT SSSTIAGGVCIGAGVGPTAITNAVGIAKAYTTRVGKGPFPTELLDSTGDWVREKGHEFGVTTGRARRCGWLDLVILKTSA RISGLTSFAVTKIDTLAGLDTLKVCTGYRLNGEIIDYVPASLEDLAKCEPIYEEFEGWDDSIANARCYEDLPENAIKYLK KIEDFTETKVSIVSVGPKRDQTMMISEI
Sequences:
>Translated_428_residues MSAFIVLGAQWGDEGKGKMTDYLAENADVVVRFQGGNNAGHTVVVGEKEYKLHLIPSGILYNDKLNVIGNGVVLDPKALF EEINYLESLGVEITPDRLIISDRAHVIMPYHRVLDGIKERARGNKDIGTTGKGIGPSYTDKMERSGIRVCDLIHKEVFEE NLKETLEVKNKIITEVFGGEALDYNEIYNEYLGYAEKLRPFVKDISVIVNKKIKDGKEVLFEGAQGTLLDIDYGTYPYVT SSSTIAGGVCIGAGVGPTAITNAVGIAKAYTTRVGKGPFPTELLDSTGDWVREKGHEFGVTTGRARRCGWLDLVILKTSA RISGLTSFAVTKIDTLAGLDTLKVCTGYRLNGEIIDYVPASLEDLAKCEPIYEEFEGWDDSIANARCYEDLPENAIKYLK KIEDFTETKVSIVSVGPKRDQTMMISEI >Mature_427_residues SAFIVLGAQWGDEGKGKMTDYLAENADVVVRFQGGNNAGHTVVVGEKEYKLHLIPSGILYNDKLNVIGNGVVLDPKALFE EINYLESLGVEITPDRLIISDRAHVIMPYHRVLDGIKERARGNKDIGTTGKGIGPSYTDKMERSGIRVCDLIHKEVFEEN LKETLEVKNKIITEVFGGEALDYNEIYNEYLGYAEKLRPFVKDISVIVNKKIKDGKEVLFEGAQGTLLDIDYGTYPYVTS SSTIAGGVCIGAGVGPTAITNAVGIAKAYTTRVGKGPFPTELLDSTGDWVREKGHEFGVTTGRARRCGWLDLVILKTSAR ISGLTSFAVTKIDTLAGLDTLKVCTGYRLNGEIIDYVPASLEDLAKCEPIYEEFEGWDDSIANARCYEDLPENAIKYLKK IEDFTETKVSIVSVGPKRDQTMMISEI
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP [H]
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family [H]
Homologues:
Organism=Homo sapiens, GI34577063, Length=427, Percent_Identity=46.135831381733, Blast_Score=375, Evalue=1e-104, Organism=Homo sapiens, GI22748717, Length=426, Percent_Identity=45.5399061032864, Blast_Score=374, Evalue=1e-104, Organism=Homo sapiens, GI40316944, Length=397, Percent_Identity=43.8287153652393, Blast_Score=332, Evalue=4e-91, Organism=Escherichia coli, GI1790620, Length=424, Percent_Identity=48.1132075471698, Blast_Score=420, Evalue=1e-118, Organism=Caenorhabditis elegans, GI25146553, Length=429, Percent_Identity=45.9207459207459, Blast_Score=368, Evalue=1e-102, Organism=Caenorhabditis elegans, GI25146555, Length=429, Percent_Identity=45.9207459207459, Blast_Score=367, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6324109, Length=434, Percent_Identity=46.0829493087558, Blast_Score=374, Evalue=1e-104, Organism=Drosophila melanogaster, GI21356033, Length=423, Percent_Identity=43.9716312056738, Blast_Score=368, Evalue=1e-102,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018220 - InterPro: IPR001114 [H]
Pfam domain/function: PF00709 Adenylsucc_synt [H]
EC number: =6.3.4.4 [H]
Molecular weight: Translated: 47073; Mature: 46942
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1 ; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFIVLGAQWGDEGKGKMTDYLAENADVVVRFQGGNNAGHTVVVGEKEYKLHLIPSGIL CCEEEEEEECCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCEEEECCCCEEEEEECCCEE YNDKLNVIGNGVVLDPKALFEEINYLESLGVEITPDRLIISDRAHVIMPYHRVLDGIKER ECCCEEEEECCEEECHHHHHHHHHHHHHCCCEECCCEEEEECCCCEEECHHHHHHHHHHH ARGNKDIGTTGKGIGPSYTDKMERSGIRVCDLIHKEVFEENLKETLEVKNKIITEVFGGE HCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ALDYNEIYNEYLGYAEKLRPFVKDISVIVNKKIKDGKEVLFEGAQGTLLDIDYGTYPYVT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEECCCCCCEEE SSSTIAGGVCIGAGVGPTAITNAVGIAKAYTTRVGKGPFPTELLDSTGDWVREKGHEFGV CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHCCCCCCC TTGRARRCGWLDLVILKTSARISGLTSFAVTKIDTLAGLDTLKVCTGYRLNGEIIDYVPA CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCEECCCEEECCCC SLEDLAKCEPIYEEFEGWDDSIANARCYEDLPENAIKYLKKIEDFTETKVSIVSVGPKRD CHHHHHHCCHHHHHHCCCCHHHCCCHHHHHCHHHHHHHHHHHHHHHHCEEEEEEECCCCC QTMMISEI CEEEEECC >Mature Secondary Structure SAFIVLGAQWGDEGKGKMTDYLAENADVVVRFQGGNNAGHTVVVGEKEYKLHLIPSGIL CEEEEEEECCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCEEEECCCCEEEEEECCCEE YNDKLNVIGNGVVLDPKALFEEINYLESLGVEITPDRLIISDRAHVIMPYHRVLDGIKER ECCCEEEEECCEEECHHHHHHHHHHHHHCCCEECCCEEEEECCCCEEECHHHHHHHHHHH ARGNKDIGTTGKGIGPSYTDKMERSGIRVCDLIHKEVFEENLKETLEVKNKIITEVFGGE HCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ALDYNEIYNEYLGYAEKLRPFVKDISVIVNKKIKDGKEVLFEGAQGTLLDIDYGTYPYVT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEECCCCCCEEE SSSTIAGGVCIGAGVGPTAITNAVGIAKAYTTRVGKGPFPTELLDSTGDWVREKGHEFGV CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHCCCCCCC TTGRARRCGWLDLVILKTSARISGLTSFAVTKIDTLAGLDTLKVCTGYRLNGEIIDYVPA CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCEECCCEEECCCC SLEDLAKCEPIYEEFEGWDDSIANARCYEDLPENAIKYLKKIEDFTETKVSIVSVGPKRD CHHHHHHCCHHHHHHCCCCHHHCCCHHHHHCHHHHHHHHHHHHHHHHCEEEEEEECCCCC QTMMISEI CEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA