| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756592
Identifier: 170756592
GI number: 170756592
Start: 3928237
End: 3928422
Strand: Reverse
Name: 170756592
Synonym: CLD_0859
Alternate gene names: NA
Gene position: 3928422-3928237 (Counterclockwise)
Preceding gene: 170757650
Following gene: 170756453
Centisome position: 99.25
GC content: 34.95
Gene sequence:
>186_bases ATGAAAATAACTAAAGATATGACAATAGGTGAAATCGTAAGAAATCATGAAGGTGCTGCAGAAGTATTAATGAGTTTTGG AATGGGTTGTGTAGGATGCCCATCTGCACAAAGTGAAACTTTAGCTGAAGCTGCAATGGTTCATGGAATGGAATTAGACG CATTATTAGAAGCATTAAATAAGTAA
Upstream 100 bases:
>100_bases AGAATATTAATATATATAAAAAATAAATATAATATCTTTAAAGAATACTAATTTATTGATATAATAATAATTAAATTTAG GAAAAGAGAGGTATTATGTT
Downstream 100 bases:
>100_bases AATAAAAAAACTCTATGTTTTAGCATAGAGTTTTTTTATTAAGTTTATATTTGCCCAAAAATTTGTTATTATTAAATTAT ATTTTATAATAGGGGGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MKITKDMTIGEIVRNHEGAAEVLMSFGMGCVGCPSAQSETLAEAAMVHGMELDALLEALNK
Sequences:
>Translated_61_residues MKITKDMTIGEIVRNHEGAAEVLMSFGMGCVGCPSAQSETLAEAAMVHGMELDALLEALNK >Mature_61_residues MKITKDMTIGEIVRNHEGAAEVLMSFGMGCVGCPSAQSETLAEAAMVHGMELDALLEALNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6452; Mature: 6452
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 9.8 %Met (Translated Protein) 13.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 9.8 %Met (Mature Protein) 13.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITKDMTIGEIVRNHEGAAEVLMSFGMGCVGCPSAQSETLAEAAMVHGMELDALLEALN CCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHC K C >Mature Secondary Structure MKITKDMTIGEIVRNHEGAAEVLMSFGMGCVGCPSAQSETLAEAAMVHGMELDALLEALN CCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA