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The map label for this gene is 170757588

Identifier: 170757588

GI number: 170757588

Start: 1266300

End: 1267211

Strand: Direct

Name: 170757588

Synonym: CLD_3425

Alternate gene names: NA

Gene position: 1266300-1267211 (Clockwise)

Preceding gene: 170756771

Following gene: 170754586

Centisome position: 31.99

GC content: 23.03

Gene sequence:

>912_bases
ATGCAGTTATACAAAATAAATAATTACAAAGTGATAGCTAAAAATTTTTATAGAGAAAGAAATATAATTAAAACCTTAGA
ATTTTATAATAAAGCTTATAATACTCCAATGGGTTCAAAAGATGTAGAACTATTATTGGATATGGCCTTAGTATATGATG
AATTAGGGGAGTATGAAAAAGCTGAGAAAAAATATAAAGAAATATTAAAAGTTAATCCAAAGGATTCTAGGGCTTTTTAT
GGATTAGCTATAATCTATGATAATAAAGAACAATACAAGAAAGCTATAAAACTATATGAGAAGGCTATAGAATATGATAA
AAATTATAATAGAGCCTACTTTTTTTTAGCAGGAGCTTATGATAATGTAGGAGAAAAAGAAAAGGCTATAAAATGTTATG
AAAAAGTAATATCTTTAGATGAAAAGGATTTTTGGAGTTATGTAAATTTAAGCTCCATATATGAAGAAGTAGGTTTCTTA
GAAAAAGCTTTGTGTTTGGCAGATAAAGCTTTGGAATTGTATCCTAATCATTATATGCCTTTATTTAATAAGGGAGTTGT
ATATAAAAAACTAAATAAATTAGAAGAAGCTATATCAAATTATAAATTATCTATAGAAGATAATGAAAATTACTCTTATA
GTTATTTGAATTTAGCTGTTATATATAAAGAATTAAAGGATTATAAAAAAGCTATAAATATAATAAGTGAAGGTATATTA
AATAATACAGAGGAAGGATTTTTATATTATAATAGAGCTTGTTATTATACTTATTTAAAAGAATATGAAAAAGCTATGAA
GGATTTATATAAGGCAGTAGAATTATATCCTGGATTTGTTAAATACATAAAAGAAGACGAAGAATTACATATATTAAAAG
ATAGAAAAGATTTTATGAATTTAATTAAATAA

Upstream 100 bases:

>100_bases
ATAAAATCATATAAGATTTAATATTATTAGAATTTCTTTTGATTTTATATATTTCATGTTATAAAATATAGTTAATCTAT
GCATTAGAAGGGGTAAAAAT

Downstream 100 bases:

>100_bases
AATTAATTTACTAAAGTTTATTTAAAAACTAGCAAAGCTAAAGAAAACATTCACATAAACTAAGAGAGACAAGTTTAATG
TACTATAACTGGAATTACAA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MQLYKINNYKVIAKNFYRERNIIKTLEFYNKAYNTPMGSKDVELLLDMALVYDELGEYEKAEKKYKEILKVNPKDSRAFY
GLAIIYDNKEQYKKAIKLYEKAIEYDKNYNRAYFFLAGAYDNVGEKEKAIKCYEKVISLDEKDFWSYVNLSSIYEEVGFL
EKALCLADKALELYPNHYMPLFNKGVVYKKLNKLEEAISNYKLSIEDNENYSYSYLNLAVIYKELKDYKKAINIISEGIL
NNTEEGFLYYNRACYYTYLKEYEKAMKDLYKAVELYPGFVKYIKEDEELHILKDRKDFMNLIK

Sequences:

>Translated_303_residues
MQLYKINNYKVIAKNFYRERNIIKTLEFYNKAYNTPMGSKDVELLLDMALVYDELGEYEKAEKKYKEILKVNPKDSRAFY
GLAIIYDNKEQYKKAIKLYEKAIEYDKNYNRAYFFLAGAYDNVGEKEKAIKCYEKVISLDEKDFWSYVNLSSIYEEVGFL
EKALCLADKALELYPNHYMPLFNKGVVYKKLNKLEEAISNYKLSIEDNENYSYSYLNLAVIYKELKDYKKAINIISEGIL
NNTEEGFLYYNRACYYTYLKEYEKAMKDLYKAVELYPGFVKYIKEDEELHILKDRKDFMNLIK
>Mature_303_residues
MQLYKINNYKVIAKNFYRERNIIKTLEFYNKAYNTPMGSKDVELLLDMALVYDELGEYEKAEKKYKEILKVNPKDSRAFY
GLAIIYDNKEQYKKAIKLYEKAIEYDKNYNRAYFFLAGAYDNVGEKEKAIKCYEKVISLDEKDFWSYVNLSSIYEEVGFL
EKALCLADKALELYPNHYMPLFNKGVVYKKLNKLEEAISNYKLSIEDNENYSYSYLNLAVIYKELKDYKKAINIISEGIL
NNTEEGFLYYNRACYYTYLKEYEKAMKDLYKAVELYPGFVKYIKEDEELHILKDRKDFMNLIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 8 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307150, Length=234, Percent_Identity=26.9230769230769, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI32307148, Length=234, Percent_Identity=26.9230769230769, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI310123097, Length=232, Percent_Identity=25, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI310131789, Length=232, Percent_Identity=25, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI310110582, Length=232, Percent_Identity=25, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=226, Percent_Identity=24.7787610619469, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI115532692, Length=216, Percent_Identity=25, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI25147174, Length=240, Percent_Identity=24.5833333333333, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI17647755, Length=234, Percent_Identity=27.7777777777778, Blast_Score=88, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24585827, Length=234, Percent_Identity=27.7777777777778, Blast_Score=88, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24585829, Length=234, Percent_Identity=27.7777777777778, Blast_Score=88, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24647123, Length=197, Percent_Identity=25.8883248730964, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI161076610, Length=205, Percent_Identity=22.4390243902439, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI19920486, Length=205, Percent_Identity=22.4390243902439, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 36201; Mature: 36201

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLYKINNYKVIAKNFYRERNIIKTLEFYNKAYNTPMGSKDVELLLDMALVYDELGEYEK
CEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHH
AEKKYKEILKVNPKDSRAFYGLAIIYDNKEQYKKAIKLYEKAIEYDKNYNRAYFFLAGAY
HHHHHHHHHCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC
DNVGEKEKAIKCYEKVISLDEKDFWSYVNLSSIYEEVGFLEKALCLADKALELYPNHYMP
CCCCHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LFNKGVVYKKLNKLEEAISNYKLSIEDNENYSYSYLNLAVIYKELKDYKKAINIISEGIL
HHCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NNTEEGFLYYNRACYYTYLKEYEKAMKDLYKAVELYPGFVKYIKEDEELHILKDRKDFMN
CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH
LIK
HCC
>Mature Secondary Structure
MQLYKINNYKVIAKNFYRERNIIKTLEFYNKAYNTPMGSKDVELLLDMALVYDELGEYEK
CEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHH
AEKKYKEILKVNPKDSRAFYGLAIIYDNKEQYKKAIKLYEKAIEYDKNYNRAYFFLAGAY
HHHHHHHHHCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC
DNVGEKEKAIKCYEKVISLDEKDFWSYVNLSSIYEEVGFLEKALCLADKALELYPNHYMP
CCCCHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LFNKGVVYKKLNKLEEAISNYKLSIEDNENYSYSYLNLAVIYKELKDYKKAINIISEGIL
HHCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NNTEEGFLYYNRACYYTYLKEYEKAMKDLYKAVELYPGFVKYIKEDEELHILKDRKDFMN
CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH
LIK
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]