Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170756771

Identifier: 170756771

GI number: 170756771

Start: 1265923

End: 1266123

Strand: Direct

Name: 170756771

Synonym: CLD_3426

Alternate gene names: NA

Gene position: 1265923-1266123 (Clockwise)

Preceding gene: 170754621

Following gene: 170757588

Centisome position: 31.98

GC content: 23.38

Gene sequence:

>201_bases
ATGATTATTGATAAAGATCAAATAAGGAATATGAACCCATATATATTATTGAGCTTAGTGAACACTAAACTAAGAGATGA
ATTTGAAAATTTGAAGGATTTTTGTAAAACCTATGATCTTAAAGAAGATGAAATCATAACTAAAATGAAAACTATAGACT
ATAAATATGATAGTGAAATAAACCAGTTTACAAGTATTTAA

Upstream 100 bases:

>100_bases
ATTATCGGTAAAAATGTTTAATATTAATAAGAATAGTCATAATTATTAATAAATAGTTTCTAAAACCTATTAAAAAAGAT
AGCATGAGAGGAGTTTGTTT

Downstream 100 bases:

>100_bases
AATAAAAAATTAAATTTTAATAGCTTCTTTCTTAAATAAGTTCATTGAAAGATTAAAAATTAAATTTTTAGCTCTTATAA
AATCATATAAGATTTAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MIIDKDQIRNMNPYILLSLVNTKLRDEFENLKDFCKTYDLKEDEIITKMKTIDYKYDSEINQFTSI

Sequences:

>Translated_66_residues
MIIDKDQIRNMNPYILLSLVNTKLRDEFENLKDFCKTYDLKEDEIITKMKTIDYKYDSEINQFTSI
>Mature_66_residues
MIIDKDQIRNMNPYILLSLVNTKLRDEFENLKDFCKTYDLKEDEIITKMKTIDYKYDSEINQFTSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8000; Mature: 8000

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIDKDQIRNMNPYILLSLVNTKLRDEFENLKDFCKTYDLKEDEIITKMKTIDYKYDSEI
CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHH
NQFTSI
HHHHCC
>Mature Secondary Structure
MIIDKDQIRNMNPYILLSLVNTKLRDEFENLKDFCKTYDLKEDEIITKMKTIDYKYDSEI
CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHH
NQFTSI
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA