| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is xpt
Identifier: 170754586
GI number: 170754586
Start: 1267372
End: 1267944
Strand: Direct
Name: xpt
Synonym: CLD_3424
Alternate gene names: 170754586
Gene position: 1267372-1267944 (Clockwise)
Preceding gene: 170757588
Following gene: 170757251
Centisome position: 32.02
GC content: 27.23
Gene sequence:
>573_bases ATGAAATTACTAGAAGATAAAATATTAAAAGAGGGTATATTATTAGAAGGGAATATACTTAAAGTAGATAGCTTTTTAAA TCATCAAATGGATGTAAAGCTATTTAATGAAATTGGAAAAGAATTTAAAAGAAGATTTGAAAGATGTAGCATAAATAAAA TATTAACTATTGAAGCTTCAGGTATAGGCATTGCTACTATAGTATCTCAATACTTTGATTTTTGTCCTGTGGTTTTTGCT AAAAAGGTAGATGCAGCAAATATGGACAAAGATACTTATGAATCAAAGGTGCACTCTTTTACTAAAAATAAAACTTATAA TGTAAGGGTATCTAAAAAATACATAAATGAAGAGGATAAAATACTTTTAATAGATGATTTTTTGGCTAATGGCTGTGCAG CTTTAGGATTGATAGATATAATAAAGCAAGGAGGAGCAGAACTTGCAGGAGTAGGAATTGCTATAGAAAAAGGATTTCAA AAAGGTAGAAAGGAATTAGAAAAGGTAGGTGCTAAAGTGGAATCTTTAGCTATATTAGATAAAATAGAAAATGATAAAGT ATATTTTAAATAA
Upstream 100 bases:
>100_bases TAAGAGAGACAAGTTTAATGTACTATAACTGGAATTACAATTTATAATAATTATATTTAATACAGTATACTTTATGTGGA AAGGGAAGGAATAGATATTT
Downstream 100 bases:
>100_bases ATATTAATTTATTATATCTTAAAAAGCATATTTAGATATTATCAAAAATAAATATAAATTTTAATTGATATGTTAAGAAA ATGATAAATATGCTCTAATA
Product: xanthine phosphoribosyltransferase
Products: NA
Alternate protein names: XPRTase 2 [H]
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKLLEDKILKEGILLEGNILKVDSFLNHQMDVKLFNEIGKEFKRRFERCSINKILTIEASGIGIATIVSQYFDFCPVVFA KKVDAANMDKDTYESKVHSFTKNKTYNVRVSKKYINEEDKILLIDDFLANGCAALGLIDIIKQGGAELAGVGIAIEKGFQ KGRKELEKVGAKVESLAILDKIENDKVYFK
Sequences:
>Translated_190_residues MKLLEDKILKEGILLEGNILKVDSFLNHQMDVKLFNEIGKEFKRRFERCSINKILTIEASGIGIATIVSQYFDFCPVVFA KKVDAANMDKDTYESKVHSFTKNKTYNVRVSKKYINEEDKILLIDDFLANGCAALGLIDIIKQGGAELAGVGIAIEKGFQ KGRKELEKVGAKVESLAILDKIENDKVYFK >Mature_190_residues MKLLEDKILKEGILLEGNILKVDSFLNHQMDVKLFNEIGKEFKRRFERCSINKILTIEASGIGIATIVSQYFDFCPVVFA KKVDAANMDKDTYESKVHSFTKNKTYNVRVSKKYINEEDKILLIDDFLANGCAALGLIDIIKQGGAELAGVGIAIEKGFQ KGRKELEKVGAKVESLAILDKIENDKVYFK
Specific function: Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. XPT subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR010079 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.22 [H]
Molecular weight: Translated: 21370; Mature: 21370
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLEDKILKEGILLEGNILKVDSFLNHQMDVKLFNEIGKEFKRRFERCSINKILTIEAS CCCHHHHHHHCCCEECCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC GIGIATIVSQYFDFCPVVFAKKVDAANMDKDTYESKVHSFTKNKTYNVRVSKKYINEEDK CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCC ILLIDDFLANGCAALGLIDIIKQGGAELAGVGIAIEKGFQKGRKELEKVGAKVESLAILD EEEEEHHHHCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KIENDKVYFK HCCCCCEEEC >Mature Secondary Structure MKLLEDKILKEGILLEGNILKVDSFLNHQMDVKLFNEIGKEFKRRFERCSINKILTIEAS CCCHHHHHHHCCCEECCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC GIGIATIVSQYFDFCPVVFAKKVDAANMDKDTYESKVHSFTKNKTYNVRVSKKYINEEDK CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCC ILLIDDFLANGCAALGLIDIIKQGGAELAGVGIAIEKGFQKGRKELEKVGAKVESLAILD EEEEEHHHHCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KIENDKVYFK HCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA