Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170757127

Identifier: 170757127

GI number: 170757127

Start: 2697197

End: 2697670

Strand: Reverse

Name: 170757127

Synonym: CLD_2055

Alternate gene names: NA

Gene position: 2697670-2697197 (Counterclockwise)

Preceding gene: 170754941

Following gene: 170756462

Centisome position: 68.15

GC content: 32.91

Gene sequence:

>474_bases
ATGGCACAACGTAGTCTAAGACAATGCAAGCAACGTTGGTGTAAGAACCTAACAAGAGATATAACAGGTTACTGCGAGGA
ACATATACACATATACGAAGAAAGAAGGGCACAAGGAAATAAATACTATGATAAGCATATAAGACATAGCAAGGATAAGA
AGTATACTAAGTTTTATCATAGTGATGAATGGGAAGATTTAAGAAAAGATGTTTTAACAACTTATAATGGTGTAGATATA
TATTCATATTATATAGAAAACAAAGCAGTAACTGCAAATACGGCGCACCACATTATAGAGTTAAAAGAGGATTGGGATAA
AAGATTAGATAAAGATAATATTTTTCCTTTAACAGATGCTAATCACAAGAAGATACACTCACTATATAGGAAGGATAAAA
AAGGAACTCAAGAACTACTTAGAGAGCTACTAGAAAGATTCAGAAAGCAATTTGGTATATCCCCCCTCCCTTAG

Upstream 100 bases:

>100_bases
TTAATGAGGTTAAGAATATAACAATAAATAATAATGTAGATATAAAAGATATAATGAAGAGGTGTGTGGAAGCAGTAATG
AGCATGGAGCCTTTACAGTA

Downstream 100 bases:

>100_bases
AGAATTTAGAGCTCTTCTAAAAGACCGAGGGGGTAGATTCCCTCGCAAAAAATTCCCTAAATGAAATTTTTGAAAAAGGA
GACTATTGCTATGGAAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: HNH Endonuclease; Gp50 Protein; Electron Transporter

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MAQRSLRQCKQRWCKNLTRDITGYCEEHIHIYEERRAQGNKYYDKHIRHSKDKKYTKFYHSDEWEDLRKDVLTTYNGVDI
YSYYIENKAVTANTAHHIIELKEDWDKRLDKDNIFPLTDANHKKIHSLYRKDKKGTQELLRELLERFRKQFGISPLP

Sequences:

>Translated_157_residues
MAQRSLRQCKQRWCKNLTRDITGYCEEHIHIYEERRAQGNKYYDKHIRHSKDKKYTKFYHSDEWEDLRKDVLTTYNGVDI
YSYYIENKAVTANTAHHIIELKEDWDKRLDKDNIFPLTDANHKKIHSLYRKDKKGTQELLRELLERFRKQFGISPLP
>Mature_156_residues
AQRSLRQCKQRWCKNLTRDITGYCEEHIHIYEERRAQGNKYYDKHIRHSKDKKYTKFYHSDEWEDLRKDVLTTYNGVDIY
SYYIENKAVTANTAHHIIELKEDWDKRLDKDNIFPLTDANHKKIHSLYRKDKKGTQELLRELLERFRKQFGISPLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19163; Mature: 19032

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQRSLRQCKQRWCKNLTRDITGYCEEHIHIYEERRAQGNKYYDKHIRHSKDKKYTKFYH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHC
SDEWEDLRKDVLTTYNGVDIYSYYIENKAVTANTAHHIIELKEDWDKRLDKDNIFPLTDA
CCCHHHHHHHHHHHCCCHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NHKKIHSLYRKDKKGTQELLRELLERFRKQFGISPLP
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AQRSLRQCKQRWCKNLTRDITGYCEEHIHIYEERRAQGNKYYDKHIRHSKDKKYTKFYH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHC
SDEWEDLRKDVLTTYNGVDIYSYYIENKAVTANTAHHIIELKEDWDKRLDKDNIFPLTDA
CCCHHHHHHHHHHHCCCHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NHKKIHSLYRKDKKGTQELLRELLERFRKQFGISPLP
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA