| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756875
Identifier: 170756875
GI number: 170756875
Start: 288538
End: 289314
Strand: Direct
Name: 170756875
Synonym: CLD_0536
Alternate gene names: NA
Gene position: 288538-289314 (Clockwise)
Preceding gene: 170755817
Following gene: 170756095
Centisome position: 7.29
GC content: 31.02
Gene sequence:
>777_bases ATGACAATAGAATTGGAAAAATACTACAATAAATTTTGTGAGGACAAAAGATTAACAAGAAGACATGGACAAGTTGAATA TATCACCTCTATGAAGTATATTCATGAGTATCTAGAGAATAATGAGAACGCAAAAATCTTAGATGTTGGTGCAGGGACAG GGAGATACTCTGTACAATTAGCAAATGAAGGATATGATGTTACTGCAATTGAACTTGTGAAGCACAATCTAGGTATTTTA AAGTCAAAAGGAAGTACAGTAAAAGCAAAGCAAGGAACAGCATTAGATTTATCAAGATTTTTAGAAAATACTTTTGATAT GACGTTGGTGTTTGGACCAATGTATCATTTATATAAATTTGAGGATAAAGTAAAAGCGCTGCAAGAGGCAAAAAGAGTAA CGAAAGTTGGAGGTGTTATCTTAGTAGCATATTGTATGAATGAATATAGTGTATTAACATATGGGTTTAAGGAAAATAAT ATCCGTGCATGTATTGATAATGGGAAACTTAATGATGATTTTCATATTATATCAGAACCAAAAGATTTATATGATTATGT AAGGATTGAAGATATTAATAAGTTAAATGAGGAAGTAAGACTGCAAAGGATAAAACTAATTGCAGCAGATGGACATGCTA ATTATATGCGACCTGTTTTGAATTCTATGGATGAAGATACATTTCAACTTTTTCTTAATTATCATTTTTCTACCTGTGAA AGACCAGATTTGCTGGGAGCAAGCGCACATACATTAGATATTTTGAGAAAAGAATAA
Upstream 100 bases:
>100_bases TTTGCTATCTAAAGTGAAGATTATTGGCATTGAAGTATACAAAGAACAATTTTTGTATTTAATAATTTATAATATAATAA CAGATGAGGAAAATAAAGAG
Downstream 100 bases:
>100_bases TATTGATATAGTTAAAAGGGTAGGAGGATGGGTAACATGAATAATAACATATTACGTACCATACCGAGTTTATATCTTGC TAATTATTTAAATGATTTTG
Product: putative methyltransferase
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein; Methionine Biosynthesis Protein MetW; Acetyl Transferase; SAM Dependant Methyltransferase
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MTIELEKYYNKFCEDKRLTRRHGQVEYITSMKYIHEYLENNENAKILDVGAGTGRYSVQLANEGYDVTAIELVKHNLGIL KSKGSTVKAKQGTALDLSRFLENTFDMTLVFGPMYHLYKFEDKVKALQEAKRVTKVGGVILVAYCMNEYSVLTYGFKENN IRACIDNGKLNDDFHIISEPKDLYDYVRIEDINKLNEEVRLQRIKLIAADGHANYMRPVLNSMDEDTFQLFLNYHFSTCE RPDLLGASAHTLDILRKE
Sequences:
>Translated_258_residues MTIELEKYYNKFCEDKRLTRRHGQVEYITSMKYIHEYLENNENAKILDVGAGTGRYSVQLANEGYDVTAIELVKHNLGIL KSKGSTVKAKQGTALDLSRFLENTFDMTLVFGPMYHLYKFEDKVKALQEAKRVTKVGGVILVAYCMNEYSVLTYGFKENN IRACIDNGKLNDDFHIISEPKDLYDYVRIEDINKLNEEVRLQRIKLIAADGHANYMRPVLNSMDEDTFQLFLNYHFSTCE RPDLLGASAHTLDILRKE >Mature_257_residues TIELEKYYNKFCEDKRLTRRHGQVEYITSMKYIHEYLENNENAKILDVGAGTGRYSVQLANEGYDVTAIELVKHNLGILK SKGSTVKAKQGTALDLSRFLENTFDMTLVFGPMYHLYKFEDKVKALQEAKRVTKVGGVILVAYCMNEYSVLTYGFKENNI RACIDNGKLNDDFHIISEPKDLYDYVRIEDINKLNEEVRLQRIKLIAADGHANYMRPVLNSMDEDTFQLFLNYHFSTCER PDLLGASAHTLDILRKE
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29789; Mature: 29658
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIELEKYYNKFCEDKRLTRRHGQVEYITSMKYIHEYLENNENAKILDVGAGTGRYSVQL CEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEE ANEGYDVTAIELVKHNLGILKSKGSTVKAKQGTALDLSRFLENTFDMTLVFGPMYHLYKF CCCCCCCHHHHHHHHCCCEEECCCCEEEECCCCHHHHHHHHHHHCCEEEEEHHHHHHHHH EDKVKALQEAKRVTKVGGVILVAYCMNEYSVLTYGFKENNIRACIDNGKLNDDFHIISEP HHHHHHHHHHHHHHHHCHHHEEEEHHCCCEEEEECCCCCCEEEEECCCCCCCCEEEECCC KDLYDYVRIEDINKLNEEVRLQRIKLIAADGHANYMRPVLNSMDEDTFQLFLNYHFSTCE HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCC RPDLLGASAHTLDILRKE CCCCCCCCHHHHHHHCCC >Mature Secondary Structure TIELEKYYNKFCEDKRLTRRHGQVEYITSMKYIHEYLENNENAKILDVGAGTGRYSVQL EEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEE ANEGYDVTAIELVKHNLGILKSKGSTVKAKQGTALDLSRFLENTFDMTLVFGPMYHLYKF CCCCCCCHHHHHHHHCCCEEECCCCEEEECCCCHHHHHHHHHHHCCEEEEEHHHHHHHHH EDKVKALQEAKRVTKVGGVILVAYCMNEYSVLTYGFKENNIRACIDNGKLNDDFHIISEP HHHHHHHHHHHHHHHHCHHHEEEEHHCCCEEEEECCCCCCEEEEECCCCCCCCEEEECCC KDLYDYVRIEDINKLNEEVRLQRIKLIAADGHANYMRPVLNSMDEDTFQLFLNYHFSTCE HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCC RPDLLGASAHTLDILRKE CCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA