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The map label for this gene is ygaK [H]

Identifier: 170755817

GI number: 170755817

Start: 286710

End: 288041

Strand: Direct

Name: ygaK [H]

Synonym: CLD_0537

Alternate gene names: 170755817

Gene position: 286710-288041 (Clockwise)

Preceding gene: 170757351

Following gene: 170756875

Centisome position: 7.24

GC content: 39.19

Gene sequence:

>1332_bases
ATGACGAAACTTACTGGCAGAATTGTTTTCCCGGATGATCCAGGTTATGATAATGCTCGAATGGATTATAATACGAGATT
CTCAAAGTATCCCTGCGCTATTGTTTTTTGCCAAGAGATTCAGGATGTAATTAATGCAGTTAAATGGGCAAGAAAGAACT
GTGTTCCAATACGTACCCGCTGCGGAGGGCACAGTTATGAAGCTTTTTCAATATTGAATAATGGAATTGTTATAGATGTA
AGCGAAATGAATAAAGTACTTCTTGAAAAAGAGAATATGGAAGTAACTATCGAGGCTGGAGCTACCTTGCTGCCGATTTA
CAAGATTTTATGGGATAAAGGTGTTACTATTCCGGGAGGAACGTGCCCAACAGTTGGCATTGCCGGGATTACGCTGGGAG
GCGGATTTGGCATGCTTACAAGAAAGATGGGTATGCTTTGTGATAGTTTGATGGCAGTTGAGATGGTCAATGCAAGAGGG
AAAGTAGTATACGCTGACCGATACGTTAATTCCGATCTTTTTTGGGCTTCCTGTGGAGGTGGGGGTGGAAACTTTGGGAT
AGTAACTTCATTTATTTTTAGGGTTCATCCTATTTCAAACGTTGCAGTTTATAATATTACGTGGGATTGGTCGGATGCTA
GAGAAATCATCAAGACATGGCAGGATTGGGCTCCATTTGTTGATGAACGATTGACATCAATTCTAGAGATATTCACTAAA
AAGGATGGTCATATTTCTTCATCCGGCGAATTTTTGGGCCATGAAGACCAGCTGAGATGCTTACTAAAACCATTAACTTC
TGTGGGCAATCCTATTCAGATTGAAGTTCAAACAATACCGTATATTGAAGCAGTAATAAAGTTTGATGGTGGGCCAGGCC
CTCATAAGTTCAAAAATACTGGGGCTTTTGTGTACCATAGGTTACCTGATGAGGCTATCGACACCCTACTTTGTTATATG
GGGATTTCCCCAAACAAAGATAACTCCATTCAATTTCAGAGTTTGGGAGGAGCAGTCAGGGAGATTCCTCCAGATGAAAC
GGCCTATTTTCATCGTAAAGCAAGCTATATCATGCAATATATAACAAACTGGAAAGTTGATAATGAAAAAAATCCGAACA
TCGTTTGGATAGAAAGGCTCAGACGAGCCATGTTAAAATATGTGAATGGAACCTACGTCAATTGGCCTGATATTTTTATT
AAAAACTGGCCATGTGCATATTATGGTACCAATTATCATGAGCTTATGCGAATTAAAAGCAAATACGATTCTGAAAATAT
ATTCCACTTTGAACAGAGTATTCGTCCAGCCAAAAAAAGAAATTATAGATAA

Upstream 100 bases:

>100_bases
TAATAATTTATACTGACTTTAAAATTGTTATCAAACTTAAAATTGAAGTCATATATTATACAATAATGAATAAAAAAGAT
TATAAGGAGGTAGGGGTAAA

Downstream 100 bases:

>100_bases
TACACACAATAAAATAGGTTTAGTAGATAATGTAGAAAAATTTGCACTCACAGGCGAAGAAATATGCCCAACTTTCAATG
ATCAAAGTTTAACTTTGTAT

Product: FAD-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MTKLTGRIVFPDDPGYDNARMDYNTRFSKYPCAIVFCQEIQDVINAVKWARKNCVPIRTRCGGHSYEAFSILNNGIVIDV
SEMNKVLLEKENMEVTIEAGATLLPIYKILWDKGVTIPGGTCPTVGIAGITLGGGFGMLTRKMGMLCDSLMAVEMVNARG
KVVYADRYVNSDLFWASCGGGGGNFGIVTSFIFRVHPISNVAVYNITWDWSDAREIIKTWQDWAPFVDERLTSILEIFTK
KDGHISSSGEFLGHEDQLRCLLKPLTSVGNPIQIEVQTIPYIEAVIKFDGGPGPHKFKNTGAFVYHRLPDEAIDTLLCYM
GISPNKDNSIQFQSLGGAVREIPPDETAYFHRKASYIMQYITNWKVDNEKNPNIVWIERLRRAMLKYVNGTYVNWPDIFI
KNWPCAYYGTNYHELMRIKSKYDSENIFHFEQSIRPAKKRNYR

Sequences:

>Translated_443_residues
MTKLTGRIVFPDDPGYDNARMDYNTRFSKYPCAIVFCQEIQDVINAVKWARKNCVPIRTRCGGHSYEAFSILNNGIVIDV
SEMNKVLLEKENMEVTIEAGATLLPIYKILWDKGVTIPGGTCPTVGIAGITLGGGFGMLTRKMGMLCDSLMAVEMVNARG
KVVYADRYVNSDLFWASCGGGGGNFGIVTSFIFRVHPISNVAVYNITWDWSDAREIIKTWQDWAPFVDERLTSILEIFTK
KDGHISSSGEFLGHEDQLRCLLKPLTSVGNPIQIEVQTIPYIEAVIKFDGGPGPHKFKNTGAFVYHRLPDEAIDTLLCYM
GISPNKDNSIQFQSLGGAVREIPPDETAYFHRKASYIMQYITNWKVDNEKNPNIVWIERLRRAMLKYVNGTYVNWPDIFI
KNWPCAYYGTNYHELMRIKSKYDSENIFHFEQSIRPAKKRNYR
>Mature_442_residues
TKLTGRIVFPDDPGYDNARMDYNTRFSKYPCAIVFCQEIQDVINAVKWARKNCVPIRTRCGGHSYEAFSILNNGIVIDVS
EMNKVLLEKENMEVTIEAGATLLPIYKILWDKGVTIPGGTCPTVGIAGITLGGGFGMLTRKMGMLCDSLMAVEMVNARGK
VVYADRYVNSDLFWASCGGGGGNFGIVTSFIFRVHPISNVAVYNITWDWSDAREIIKTWQDWAPFVDERLTSILEIFTKK
DGHISSSGEFLGHEDQLRCLLKPLTSVGNPIQIEVQTIPYIEAVIKFDGGPGPHKFKNTGAFVYHRLPDEAIDTLLCYMG
ISPNKDNSIQFQSLGGAVREIPPDETAYFHRKASYIMQYITNWKVDNEKNPNIVWIERLRRAMLKYVNGTYVNWPDIFIK
NWPCAYYGTNYHELMRIKSKYDSENIFHFEQSIRPAKKRNYR

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50349; Mature: 50218

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLTGRIVFPDDPGYDNARMDYNTRFSKYPCAIVFCQEIQDVINAVKWARKNCVPIRTR
CCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEC
CGGHSYEAFSILNNGIVIDVSEMNKVLLEKENMEVTIEAGATLLPIYKILWDKGVTIPGG
CCCCCCHHHHHHCCCEEEEHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCC
TCPTVGIAGITLGGGFGMLTRKMGMLCDSLMAVEMVNARGKVVYADRYVNSDLFWASCGG
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCC
GGGNFGIVTSFIFRVHPISNVAVYNITWDWSDAREIIKTWQDWAPFVDERLTSILEIFTK
CCCCHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KDGHISSSGEFLGHEDQLRCLLKPLTSVGNPIQIEVQTIPYIEAVIKFDGGPGPHKFKNT
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCC
GAFVYHRLPDEAIDTLLCYMGISPNKDNSIQFQSLGGAVREIPPDETAYFHRKASYIMQY
CEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEHHHCCHHHCCCCCCHHHHHHHHHHHHHH
ITNWKVDNEKNPNIVWIERLRRAMLKYVNGTYVNWPDIFIKNWPCAYYGTNYHELMRIKS
HHCCCCCCCCCCCEEHHHHHHHHHHHHHCCCEEECCCEEEECCCCEECCCCHHHHHHHHH
KYDSENIFHFEQSIRPAKKRNYR
HCCCCCEEEEHHHCCCHHHCCCC
>Mature Secondary Structure 
TKLTGRIVFPDDPGYDNARMDYNTRFSKYPCAIVFCQEIQDVINAVKWARKNCVPIRTR
CCEEEEEECCCCCCCCCCEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEC
CGGHSYEAFSILNNGIVIDVSEMNKVLLEKENMEVTIEAGATLLPIYKILWDKGVTIPGG
CCCCCCHHHHHHCCCEEEEHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCC
TCPTVGIAGITLGGGFGMLTRKMGMLCDSLMAVEMVNARGKVVYADRYVNSDLFWASCGG
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCC
GGGNFGIVTSFIFRVHPISNVAVYNITWDWSDAREIIKTWQDWAPFVDERLTSILEIFTK
CCCCHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KDGHISSSGEFLGHEDQLRCLLKPLTSVGNPIQIEVQTIPYIEAVIKFDGGPGPHKFKNT
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCC
GAFVYHRLPDEAIDTLLCYMGISPNKDNSIQFQSLGGAVREIPPDETAYFHRKASYIMQY
CEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEHHHCCHHHCCCCCCHHHHHHHHHHHHHH
ITNWKVDNEKNPNIVWIERLRRAMLKYVNGTYVNWPDIFIKNWPCAYYGTNYHELMRIKS
HHCCCCCCCCCCCEEHHHHHHHHHHHHHCCCEEECCCEEEECCCCEECCCCHHHHHHHHH
KYDSENIFHFEQSIRPAKKRNYR
HCCCCCEEEEHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]