| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756095
Identifier: 170756095
GI number: 170756095
Start: 289351
End: 290046
Strand: Direct
Name: 170756095
Synonym: CLD_0535
Alternate gene names: NA
Gene position: 289351-290046 (Clockwise)
Preceding gene: 170756875
Following gene: 170757272
Centisome position: 7.31
GC content: 32.33
Gene sequence:
>696_bases ATGAATAATAACATATTACGTACCATACCGAGTTTATATCTTGCTAATTATTTAAATGATTTTGAGGATCTTTTAGCTAA GTACAATATAGTAAAGAAGGCTTATAAGAAGGGTGAAGTTTTAACTCAATGTGGAGCAATCAGTGAAACTGCATATTATG TGAAAAATGGAATTATGCATCTTTCTATCGGGCATGAAGAAGGAGAGAAGTCTATATGCCTTTTTGGTCAAGGAACAATT TTTCCGATTGGTGTGGAACACCGCAAGTTCAAGATGGATTATGAAATGATTATAAGGGCATTTTCAGACTTAGAAGTATA TAGCATGTCTTATCAAACATTAAAGAAAGTTGCAGAGGAAAATGGAAGATTTACAGGAGAATTGCTTAGGGAAAATTGTG ACTTTGTTGGCTATATGTTTTTAGATTCAGTTAATCAAACATTCGAACCATGTTTAAGCAGAATTTGTGACATTTTATAT TTATATTTAATAAATGTTCAGCCCAATGAAGATAAAATTCCGCTGACTCAGTCAAAGCTAGCAAATCTTGCAAGTGCTTC TAGAGCACAGATGGAAAGGTCATTAAAAATACTTCGAAAAGAACAGACTATCGAGACAGCAAGGGGATATATAAAAGTTT TAAACCGCAAAAAACTATTTACATATTGTACACAAGGGGTACATGAAAATATTTAA
Upstream 100 bases:
>100_bases CTGTGAAAGACCAGATTTGCTGGGAGCAAGCGCACATACATTAGATATTTTGAGAAAAGAATAATATTGATATAGTTAAA AGGGTAGGAGGATGGGTAAC
Downstream 100 bases:
>100_bases AAATGAAAATATAGTTAGAAAACTGAGTATATGCGAAAGTATATGCTCTTTTATTGTAATAAGCTGCTTTTTCTAATCCA TCATATGAGGGAGAAGAAGA
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MNNNILRTIPSLYLANYLNDFEDLLAKYNIVKKAYKKGEVLTQCGAISETAYYVKNGIMHLSIGHEEGEKSICLFGQGTI FPIGVEHRKFKMDYEMIIRAFSDLEVYSMSYQTLKKVAEENGRFTGELLRENCDFVGYMFLDSVNQTFEPCLSRICDILY LYLINVQPNEDKIPLTQSKLANLASASRAQMERSLKILRKEQTIETARGYIKVLNRKKLFTYCTQGVHENI
Sequences:
>Translated_231_residues MNNNILRTIPSLYLANYLNDFEDLLAKYNIVKKAYKKGEVLTQCGAISETAYYVKNGIMHLSIGHEEGEKSICLFGQGTI FPIGVEHRKFKMDYEMIIRAFSDLEVYSMSYQTLKKVAEENGRFTGELLRENCDFVGYMFLDSVNQTFEPCLSRICDILY LYLINVQPNEDKIPLTQSKLANLASASRAQMERSLKILRKEQTIETARGYIKVLNRKKLFTYCTQGVHENI >Mature_231_residues MNNNILRTIPSLYLANYLNDFEDLLAKYNIVKKAYKKGEVLTQCGAISETAYYVKNGIMHLSIGHEEGEKSICLFGQGTI FPIGVEHRKFKMDYEMIIRAFSDLEVYSMSYQTLKKVAEENGRFTGELLRENCDFVGYMFLDSVNQTFEPCLSRICDILY LYLINVQPNEDKIPLTQSKLANLASASRAQMERSLKILRKEQTIETARGYIKVLNRKKLFTYCTQGVHENI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26619; Mature: 26619
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNILRTIPSLYLANYLNDFEDLLAKYNIVKKAYKKGEVLTQCGAISETAYYVKNGIMH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHCCCEE LSIGHEEGEKSICLFGQGTIFPIGVEHRKFKMDYEMIIRAFSDLEVYSMSYQTLKKVAEE EEECCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NGRFTGELLRENCDFVGYMFLDSVNQTFEPCLSRICDILYLYLINVQPNEDKIPLTQSKL CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH ANLASASRAQMERSLKILRKEQTIETARGYIKVLNRKKLFTYCTQGVHENI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNNNILRTIPSLYLANYLNDFEDLLAKYNIVKKAYKKGEVLTQCGAISETAYYVKNGIMH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHCCCEE LSIGHEEGEKSICLFGQGTIFPIGVEHRKFKMDYEMIIRAFSDLEVYSMSYQTLKKVAEE EEECCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NGRFTGELLRENCDFVGYMFLDSVNQTFEPCLSRICDILYLYLINVQPNEDKIPLTQSKL CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH ANLASASRAQMERSLKILRKEQTIETARGYIKVLNRKKLFTYCTQGVHENI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA