Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756731

Identifier: 170756731

GI number: 170756731

Start: 2875559

End: 2876809

Strand: Reverse

Name: 170756731

Synonym: CLD_1866

Alternate gene names: NA

Gene position: 2876809-2875559 (Counterclockwise)

Preceding gene: 170755661

Following gene: 170756369

Centisome position: 72.68

GC content: 26.06

Gene sequence:

>1251_bases
GTGAGAAAAAGAGATATAAAAATTTTTCAAGCTCATAATAATAGCCTTACTATAAAAGTAGATAACATACTTTTACATAG
TGAATATTATCCAGAAAAAGTTTGTGAAAAGTTTATTGAAAATAATACAGATATTTATATGGACAAAAAAAATGTGGTAG
TATATGGTATTGCTTTAGGGTATCATATACAAGCTTTATTAAATAGAGTTAGTGATGATACAATGATTCATGTCTTTGAT
GTAGATAGAGAGATTTATAATACAGGTAAAAATTATGGAACATATAAAAATTTTATAAATGATCCCCGGGTTAATTTACA
CATAGGAGCTTCTGATGAGTTTTTTTATAACTTAAAGTTAAAACTACAGGAAGTAGAAGATATCTTAATATATACACCTT
CCTTGAAAATTTTGTCTGAGGAATATTCTAATATTAAAGATATATTTAGAAATTTTAAAATGGCTAAAATGGGCATAAAT
GAATTTAAAGATATAATGGAAGAAAATTATCATTCCAATTTAAAAAAACATCATTTTACTATGAGGGATTTTTATAGCAA
ATATAATTTTAGGGATGAAAAAATTATAATAGCAGCTTCGGGTCCTTCACTAGACGAAAACATTGAAAAATTAAAAAAAT
TCCAAGGTAATATTAAAATATTTTCCGTGGGTAGTGCCCTTAGAACCTTAATAGATAACGGAATAAAGCCATATATGATA
TGTATAATAGACCCATCTAAATTAGTTTATAATCAAATAAAAGGTTTTGAAAATTTAGATATACCATTATGTTTTTTAAA
AACAGCATCTAGATGGGCAGTATCTAAATACAATGGCCCTAAGTATATGTTTTATAATGATGAAAATGATATTGATGATA
TAGTAATAAACACAGGTAAGACTGTAGCTATTCCTACTATGGATATTGCAGTTAAAGGAGGAGCTAAAGAGGTACTTTTA
GTAGGACAAGACTTAGCCTTTATAAATAATAAATCCCATACAGACTATATAAATGAAAGTTACAAAGATGCTAATATTAC
TAATGAAGTAAAAGGTGACAATTCCTTATATAAAAAAGTGGAAGGGGTAAAAGGAGATATTTTGTATACTAGATCAGAAT
ATTTAAATTTTAAGCATTTTATAGAATTAGAAATAAAAAACAATCCTCAAGTAAATTTTATTAATTGTAGCAGTGGTGCT
AAAATAAGGGGCACAGAATATGTAGACTTAGAAAAAATAGAGTTTTCATAA

Upstream 100 bases:

>100_bases
TAGGAGATATATTTATTTATAAGTTATTGCCAATTGTAAATAAAGTTGAAAATATGTTTACAAAATTAGTATAATTTTTG
TAAGGATGGAGATGAAGTAA

Downstream 100 bases:

>100_bases
AAATATTGTTGATTGTGTGAACAATCTAATTTTAGGTATACTAATAAAATAACAGATTTAGCAAAGGCAATGCTTTCAGA
GTGTAAATTAAAGGGAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MRKRDIKIFQAHNNSLTIKVDNILLHSEYYPEKVCEKFIENNTDIYMDKKNVVVYGIALGYHIQALLNRVSDDTMIHVFD
VDREIYNTGKNYGTYKNFINDPRVNLHIGASDEFFYNLKLKLQEVEDILIYTPSLKILSEEYSNIKDIFRNFKMAKMGIN
EFKDIMEENYHSNLKKHHFTMRDFYSKYNFRDEKIIIAASGPSLDENIEKLKKFQGNIKIFSVGSALRTLIDNGIKPYMI
CIIDPSKLVYNQIKGFENLDIPLCFLKTASRWAVSKYNGPKYMFYNDENDIDDIVINTGKTVAIPTMDIAVKGGAKEVLL
VGQDLAFINNKSHTDYINESYKDANITNEVKGDNSLYKKVEGVKGDILYTRSEYLNFKHFIELEIKNNPQVNFINCSSGA
KIRGTEYVDLEKIEFS

Sequences:

>Translated_416_residues
MRKRDIKIFQAHNNSLTIKVDNILLHSEYYPEKVCEKFIENNTDIYMDKKNVVVYGIALGYHIQALLNRVSDDTMIHVFD
VDREIYNTGKNYGTYKNFINDPRVNLHIGASDEFFYNLKLKLQEVEDILIYTPSLKILSEEYSNIKDIFRNFKMAKMGIN
EFKDIMEENYHSNLKKHHFTMRDFYSKYNFRDEKIIIAASGPSLDENIEKLKKFQGNIKIFSVGSALRTLIDNGIKPYMI
CIIDPSKLVYNQIKGFENLDIPLCFLKTASRWAVSKYNGPKYMFYNDENDIDDIVINTGKTVAIPTMDIAVKGGAKEVLL
VGQDLAFINNKSHTDYINESYKDANITNEVKGDNSLYKKVEGVKGDILYTRSEYLNFKHFIELEIKNNPQVNFINCSSGA
KIRGTEYVDLEKIEFS
>Mature_416_residues
MRKRDIKIFQAHNNSLTIKVDNILLHSEYYPEKVCEKFIENNTDIYMDKKNVVVYGIALGYHIQALLNRVSDDTMIHVFD
VDREIYNTGKNYGTYKNFINDPRVNLHIGASDEFFYNLKLKLQEVEDILIYTPSLKILSEEYSNIKDIFRNFKMAKMGIN
EFKDIMEENYHSNLKKHHFTMRDFYSKYNFRDEKIIIAASGPSLDENIEKLKKFQGNIKIFSVGSALRTLIDNGIKPYMI
CIIDPSKLVYNQIKGFENLDIPLCFLKTASRWAVSKYNGPKYMFYNDENDIDDIVINTGKTVAIPTMDIAVKGGAKEVLL
VGQDLAFINNKSHTDYINESYKDANITNEVKGDNSLYKKVEGVKGDILYTRSEYLNFKHFIELEIKNNPQVNFINCSSGA
KIRGTEYVDLEKIEFS

Specific function: Unknown

COG id: COG2604

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48226; Mature: 48226

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRDIKIFQAHNNSLTIKVDNILLHSEYYPEKVCEKFIENNTDIYMDKKNVVVYGIALG
CCCCEEEEEEECCCEEEEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCEEEEEEEHH
YHIQALLNRVSDDTMIHVFDVDREIYNTGKNYGTYKNFINDPRVNLHIGASDEFFYNLKL
HHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCHHHHCCCCCEEEEECCCCCEEEEEEE
KLQEVEDILIYTPSLKILSEEYSNIKDIFRNFKMAKMGINEFKDIMEENYHSNLKKHHFT
EEEECCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCHHHHCCH
MRDFYSKYNFRDEKIIIAASGPSLDENIEKLKKFQGNIKIFSVGSALRTLIDNGIKPYMI
HHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCEEEE
CIIDPSKLVYNQIKGFENLDIPLCFLKTASRWAVSKYNGPKYMFYNDENDIDDIVINTGK
EEECCHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCEEEEECCC
TVAIPTMDIAVKGGAKEVLLVGQDLAFINNKSHTDYINESYKDANITNEVKGDNSLYKKV
EEEEEEEEEEEECCCCEEEEEECCEEEECCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHH
EGVKGDILYTRSEYLNFKHFIELEIKNNPQVNFINCSSGAKIRGTEYVDLEKIEFS
CCCCCEEEEEHHHHCCEEEEEEEEECCCCCEEEEECCCCCEECCCEEEEEEEEECC
>Mature Secondary Structure
MRKRDIKIFQAHNNSLTIKVDNILLHSEYYPEKVCEKFIENNTDIYMDKKNVVVYGIALG
CCCCEEEEEEECCCEEEEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCEEEEEEEHH
YHIQALLNRVSDDTMIHVFDVDREIYNTGKNYGTYKNFINDPRVNLHIGASDEFFYNLKL
HHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCHHHHCCCCCEEEEECCCCCEEEEEEE
KLQEVEDILIYTPSLKILSEEYSNIKDIFRNFKMAKMGINEFKDIMEENYHSNLKKHHFT
EEEECCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCHHHHCCH
MRDFYSKYNFRDEKIIIAASGPSLDENIEKLKKFQGNIKIFSVGSALRTLIDNGIKPYMI
HHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCEEEE
CIIDPSKLVYNQIKGFENLDIPLCFLKTASRWAVSKYNGPKYMFYNDENDIDDIVINTGK
EEECCHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCEEEEECCC
TVAIPTMDIAVKGGAKEVLLVGQDLAFINNKSHTDYINESYKDANITNEVKGDNSLYKKV
EEEEEEEEEEEECCCCEEEEEECCEEEECCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHH
EGVKGDILYTRSEYLNFKHFIELEIKNNPQVNFINCSSGAKIRGTEYVDLEKIEFS
CCCCCEEEEEHHHHCCEEEEEEEEECCCCCEEEEECCCCCEECCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA