Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756338

Identifier: 170756338

GI number: 170756338

Start: 3347773

End: 3348876

Strand: Reverse

Name: 170756338

Synonym: CLD_1438

Alternate gene names: NA

Gene position: 3348876-3347773 (Counterclockwise)

Preceding gene: 170755751

Following gene: 170757348

Centisome position: 84.61

GC content: 24.28

Gene sequence:

>1104_bases
ATGAGTGTTAAGAATTGTATTTTTCATATACCTTACTATTTAGATTTAAAATGGCCTTCAGGTTCTAATATTAGACCAAT
AAAAATGATAAAGGCATTTGAAAGTATAGGATATAATGTAGATATAGTCATGGGATATGCAGAGGAAAGAAAAAGTAGAA
TAGAATCCATAAAGAATAAAATAAAATCTGGAGTAAAATATGACTTTGTATATTCAGAGAGTTCGACAGAACCAACACTA
TTAACTGAAAAAAATCACATGCCAAAATATCCATTATTAGATTTTTCATTCTTAAAACATTGTAAAAGCAAATCTATACC
AATAGGATTATTCTATAGAGATATATATTGGCAATTTAAAGTATATGATGAGAGTTTACCTTTTTTAAAGAGAACTATTG
CAAAAATGTTTTACAGATATGATTTAATTCAATATAAGAATATCTTAGATATATTCTATTTACCATCAGAAAATATGATG
AAATATGTTCCAGGGAAATATGACTTTATTGTTGAAGAACTACCACCAGCTATTGATGTTATTCATGAGAATAATAAAAT
TTTTGAAGATGATTATATAAATCTATTTTATGTTGGAGGAATAGGTGAATTATATAATTTAGAAAAATTATTCCAATTAG
TAAATAAGAAAGAGTATATTAAATTTACAGTTTGTTGTAGAAAAAATGAATGGGAATCAAATAAAAATATATATGAAAAA
TATTTAAACGATAGAATAAAAATAATACATAAATCTGGTGAAGAGTTATTACCTTATTTTGAAGAAGCAGATATATTTAG
TTTATTTTTTGAACCCATAGAATATAGAAAATTTGCCATGCCAGTAAAACTATTTGAGTACTTAGCTTATAAAAAACCTA
TAATATCTACTAATGGAACTGCTACAGGTGATTTTGTAGAAAAAAATTCTATAGGTTGGTGTTCGGATTATTCAGTTGAA
GATTTAAGCAATATATTTGATAGTATTTACTATAGCAAAGAAGAATATTTTAATATAGTAAAAAACATAGATAATATTAT
TAATAAACATACATGGAAAGCTAGAGCTATAAAAGTAGTAGAGGATTTAACAAATCTTCAATAA

Upstream 100 bases:

>100_bases
TTTGCTAAATATATGGATAAAATTAAAATTTTAAAACATATAAAAGTTTATGTACTAAAATTTACTTCCTTAAATATTAA
AATTAAGAAAGAGGATAAAA

Downstream 100 bases:

>100_bases
TACTTTTAATGGAGGAATAATAATGAAAATATGTTATTTAGCTGATGCTAATAGTACACATACTAAAAAATGGTGTAGAT
TTTTTAAGAATAAAGGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyltransferase

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MSVKNCIFHIPYYLDLKWPSGSNIRPIKMIKAFESIGYNVDIVMGYAEERKSRIESIKNKIKSGVKYDFVYSESSTEPTL
LTEKNHMPKYPLLDFSFLKHCKSKSIPIGLFYRDIYWQFKVYDESLPFLKRTIAKMFYRYDLIQYKNILDIFYLPSENMM
KYVPGKYDFIVEELPPAIDVIHENNKIFEDDYINLFYVGGIGELYNLEKLFQLVNKKEYIKFTVCCRKNEWESNKNIYEK
YLNDRIKIIHKSGEELLPYFEEADIFSLFFEPIEYRKFAMPVKLFEYLAYKKPIISTNGTATGDFVEKNSIGWCSDYSVE
DLSNIFDSIYYSKEEYFNIVKNIDNIINKHTWKARAIKVVEDLTNLQ

Sequences:

>Translated_367_residues
MSVKNCIFHIPYYLDLKWPSGSNIRPIKMIKAFESIGYNVDIVMGYAEERKSRIESIKNKIKSGVKYDFVYSESSTEPTL
LTEKNHMPKYPLLDFSFLKHCKSKSIPIGLFYRDIYWQFKVYDESLPFLKRTIAKMFYRYDLIQYKNILDIFYLPSENMM
KYVPGKYDFIVEELPPAIDVIHENNKIFEDDYINLFYVGGIGELYNLEKLFQLVNKKEYIKFTVCCRKNEWESNKNIYEK
YLNDRIKIIHKSGEELLPYFEEADIFSLFFEPIEYRKFAMPVKLFEYLAYKKPIISTNGTATGDFVEKNSIGWCSDYSVE
DLSNIFDSIYYSKEEYFNIVKNIDNIINKHTWKARAIKVVEDLTNLQ
>Mature_366_residues
SVKNCIFHIPYYLDLKWPSGSNIRPIKMIKAFESIGYNVDIVMGYAEERKSRIESIKNKIKSGVKYDFVYSESSTEPTLL
TEKNHMPKYPLLDFSFLKHCKSKSIPIGLFYRDIYWQFKVYDESLPFLKRTIAKMFYRYDLIQYKNILDIFYLPSENMMK
YVPGKYDFIVEELPPAIDVIHENNKIFEDDYINLFYVGGIGELYNLEKLFQLVNKKEYIKFTVCCRKNEWESNKNIYEKY
LNDRIKIIHKSGEELLPYFEEADIFSLFFEPIEYRKFAMPVKLFEYLAYKKPIISTNGTATGDFVEKNSIGWCSDYSVED
LSNIFDSIYYSKEEYFNIVKNIDNIINKHTWKARAIKVVEDLTNLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43683; Mature: 43552

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKNCIFHIPYYLDLKWPSGSNIRPIKMIKAFESIGYNVDIVMGYAEERKSRIESIKNK
CCCCCEEEECCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHH
IKSGVKYDFVYSESSTEPTLLTEKNHMPKYPLLDFSFLKHCKSKSIPIGLFYRDIYWQFK
HHCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEEEEEE
VYDESLPFLKRTIAKMFYRYDLIQYKNILDIFYLPSENMMKYVPGKYDFIVEELPPAIDV
EECCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHCCCCHHHHHHHCCCCEEE
IHENNKIFEDDYINLFYVGGIGELYNLEKLFQLVNKKEYIKFTVCCRKNEWESNKNIYEK
EECCCCEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHH
YLNDRIKIIHKSGEELLPYFEEADIFSLFFEPIEYRKFAMPVKLFEYLAYKKPIISTNGT
HHCCHHEEEECCCCHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
ATGDFVEKNSIGWCSDYSVEDLSNIFDSIYYSKEEYFNIVKNIDNIINKHTWKARAIKVV
CCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
EDLTNLQ
HHHHCCC
>Mature Secondary Structure 
SVKNCIFHIPYYLDLKWPSGSNIRPIKMIKAFESIGYNVDIVMGYAEERKSRIESIKNK
CCCCEEEECCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHH
IKSGVKYDFVYSESSTEPTLLTEKNHMPKYPLLDFSFLKHCKSKSIPIGLFYRDIYWQFK
HHCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEEEEEE
VYDESLPFLKRTIAKMFYRYDLIQYKNILDIFYLPSENMMKYVPGKYDFIVEELPPAIDV
EECCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHCCCCHHHHHHHCCCCEEE
IHENNKIFEDDYINLFYVGGIGELYNLEKLFQLVNKKEYIKFTVCCRKNEWESNKNIYEK
EECCCCEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHH
YLNDRIKIIHKSGEELLPYFEEADIFSLFFEPIEYRKFAMPVKLFEYLAYKKPIISTNGT
HHCCHHEEEECCCCHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
ATGDFVEKNSIGWCSDYSVEDLSNIFDSIYYSKEEYFNIVKNIDNIINKHTWKARAIKVV
CCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
EDLTNLQ
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA