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The map label for this gene is pyrK

Identifier: 170756240

GI number: 170756240

Start: 3515864

End: 3516622

Strand: Reverse

Name: pyrK

Synonym: CLD_1294

Alternate gene names: 170756240

Gene position: 3516622-3515864 (Counterclockwise)

Preceding gene: 170757462

Following gene: 170755388

Centisome position: 88.84

GC content: 30.96

Gene sequence:

>759_bases
GTGGTGTGTAAAATAAACTCTAAAACTTTTAAAGTAAAGGTAATAGAAAATAAAAGTATATCAACAGGTATATTTAAAAT
GACTTTAGAAGGTGCTTTTAAAGGGAGGCCAGGACAGTTTTATATGATAAGAGCTTGGCAAGATGAGCCTATTTTATGGA
GACCTATAAGTATACATGATATAAATGATAATTCTATAGAATTTTTATATAAATTAGAAGGAAGGGGAACTAAAATCTTA
TCTAAAATAAAATTAGAAGAAGAAGTTGAGATAATGGGACCCTTAGGGAACGGATTTGATTTAGAGAAAATAAAGGGGAA
AATAGCTATAGTAACTGGTGGTATAGGAATAGCTCCTATGAATTATTTGATAAAAAGTATGAAAAATATAGATATGGATA
TTTATGCAGGCTTTAGAGATGAGGTTTATTGCATCGAAGATTTTAATAATTTAGTGGATAAGGTAGTTGCAGTTACAGAG
GATGGTAGTTCTGGAGAAAAAGGATATGTAACAGATTATTTTCATCCAGAAGATTATGATTTGGTTTTGTGTTGTGGCCC
GGAAATAATGATGAATAAAGTTATATTAATGTGTAGGGAGAAGAAGATTGCTTTATACGTATCTATGGAAAAAAGAATGG
CTTGTGGTATAGGGGCATGTCTTGTGTGTACTTGTAAAACTAAATTTGGTAATAAAAGAACTTGCAAGGATGGTCCCGTA
TTTAAAGGAGAGGACATTCTTTTGAAAGGAGATATATAA

Upstream 100 bases:

>100_bases
AGAACTTATTAAGGAGTGTATTAGTAGTTGTTTCTTATCTAAAAAGGATAGGGTATTGGACTTAGTAGCTATGGGATAAA
TTATTAGATTACTAGAAAGA

Downstream 100 bases:

>100_bases
TGCTTCAAGTAAATTTATGTGGTAAGATCTTTAAAAATCCTATTATAGCTGCATCAGGAACTTTTGGATTTGGAGAAGAA
TATGGGGAATTTTATGATGT

Product: dihydroorotate dehydrogenase electron transfer subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MVCKINSKTFKVKVIENKSISTGIFKMTLEGAFKGRPGQFYMIRAWQDEPILWRPISIHDINDNSIEFLYKLEGRGTKIL
SKIKLEEEVEIMGPLGNGFDLEKIKGKIAIVTGGIGIAPMNYLIKSMKNIDMDIYAGFRDEVYCIEDFNNLVDKVVAVTE
DGSSGEKGYVTDYFHPEDYDLVLCCGPEIMMNKVILMCREKKIALYVSMEKRMACGIGACLVCTCKTKFGNKRTCKDGPV
FKGEDILLKGDI

Sequences:

>Translated_252_residues
MVCKINSKTFKVKVIENKSISTGIFKMTLEGAFKGRPGQFYMIRAWQDEPILWRPISIHDINDNSIEFLYKLEGRGTKIL
SKIKLEEEVEIMGPLGNGFDLEKIKGKIAIVTGGIGIAPMNYLIKSMKNIDMDIYAGFRDEVYCIEDFNNLVDKVVAVTE
DGSSGEKGYVTDYFHPEDYDLVLCCGPEIMMNKVILMCREKKIALYVSMEKRMACGIGACLVCTCKTKFGNKRTCKDGPV
FKGEDILLKGDI
>Mature_252_residues
MVCKINSKTFKVKVIENKSISTGIFKMTLEGAFKGRPGQFYMIRAWQDEPILWRPISIHDINDNSIEFLYKLEGRGTKIL
SKIKLEEEVEIMGPLGNGFDLEKIKGKIAIVTGGIGIAPMNYLIKSMKNIDMDIYAGFRDEVYCIEDFNNLVDKVVAVTE
DGSSGEKGYVTDYFHPEDYDLVLCCGPEIMMNKVILMCREKKIALYVSMEKRMACGIGACLVCTCKTKFGNKRTCKDGPV
FKGEDILLKGDI

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 28349; Mature: 28349

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCKINSKTFKVKVIENKSISTGIFKMTLEGAFKGRPGQFYMIRAWQDEPILWRPISIHD
CEEEECCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEEEE
INDNSIEFLYKLEGRGTKILSKIKLEEEVEIMGPLGNGFDLEKIKGKIAIVTGGIGIAPM
CCCCCEEEEEEECCCCCEEHHHCCCCCCEEEECCCCCCEEHHHHCCEEEEEECCCCHHHH
NYLIKSMKNIDMDIYAGFRDEVYCIEDFNNLVDKVVAVTEDGSSGEKGYVTDYFHPEDYD
HHHHHHHHCCCEEEEECCCCCEEEEHHHHHHHHHEEEEECCCCCCCCCEEEECCCCCCCE
LVLCCGPEIMMNKVILMCREKKIALYVSMEKRMACGIGACLVCTCKTKFGNKRTCKDGPV
EEEEECCHHHHHHEEEEEECCEEEEEEEECHHHHCCCCEEEEEEEECCCCCCCCCCCCCE
FKGEDILLKGDI
ECCCEEEEECCC
>Mature Secondary Structure
MVCKINSKTFKVKVIENKSISTGIFKMTLEGAFKGRPGQFYMIRAWQDEPILWRPISIHD
CEEEECCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEEEE
INDNSIEFLYKLEGRGTKILSKIKLEEEVEIMGPLGNGFDLEKIKGKIAIVTGGIGIAPM
CCCCCEEEEEEECCCCCEEHHHCCCCCCEEEECCCCCCEEHHHHCCEEEEEECCCCHHHH
NYLIKSMKNIDMDIYAGFRDEVYCIEDFNNLVDKVVAVTEDGSSGEKGYVTDYFHPEDYD
HHHHHHHHCCCEEEEECCCCCEEEEHHHHHHHHHEEEEECCCCCCCCCEEEECCCCCCCE
LVLCCGPEIMMNKVILMCREKKIALYVSMEKRMACGIGACLVCTCKTKFGNKRTCKDGPV
EEEEECCHHHHHHEEEEEECCEEEEEEEECHHHHCCCCEEEEEEEECCCCCCCCCCCCCE
FKGEDILLKGDI
ECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]