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The map label for this gene is pyrF

Identifier: 170757462

GI number: 170757462

Start: 3516752

End: 3517603

Strand: Reverse

Name: pyrF

Synonym: CLD_1293

Alternate gene names: 170757462

Gene position: 3517603-3516752 (Counterclockwise)

Preceding gene: 170755484

Following gene: 170756240

Centisome position: 88.87

GC content: 28.76

Gene sequence:

>852_bases
TTGATTATAGATAAATTGTATGAAAACGTAGAGAAAAAAGGATGTGTTTGTGTAGGCCTTGATACGGATATAAGTTATCT
ACCAAAAGGATTTTTAAATAAATTTACTAACATAGAAGATGCTATATTTGCATTTAATCAAAGGATAGTTGATTCAACTT
TTGATGTATCAGCTTGTTACAAAGTTCAGATAGCTTATTATGAGGCTATGGGAATTAAAGGAATGATTTTATATAAGAAA
ACTTTAGAATATATAAGAAAAAAAGGCGGTATAGTTATAGCAGATATAAAAAGAGGAGATATATCTGCTACAGCTAAAAT
GTATGCAAAAGCTCATTTTGAAGGAGATTTTGAAAGTGATTTTATAACATTAAACCCATATATGGGAATGGATACTTTAG
AACCTTATAAAGATTATTTCAAAAATAAGGAGAAGGGAGTTTTCTTGTTATTAAGAACTTCTAATGAAGGTTCAAAGGAT
ATACAATATTTAGATTTGAAAGACAATAAAAAGGTATACAACAAAGTAGGAGAAAAAATAGAGAACATAGGGAAAGAATT
TTTAGGCAATTGTGGATATAGTTCTATAGGAGCAGTAGTTGGATGTACAGCAGAAGAAAATAATATTAGAAAAGAATTAA
AACATACGTTTTTCTTAATACCTGGCTATGGCGCTCAGGGAGGGAAAGCTGAAGTTGCTAAATCTTATTTAAGTGAAGGT
AACGGAGGTATTGTAAATTCTTCAAGAGGGATATTGCTTGCATATAAAAAATATGATGAAGAAGGAAAAAACTTTGAAGA
ATGTGCAAGAAATGAAGTTATAAATATGAAAAAAACTTTACAGATTATATAG

Upstream 100 bases:

>100_bases
CTATGGATGGTATGTGTCTTAAAGGAAGAGTTAAAGTTACATTTAAAGCAGGATGTATAGTATATAGTGAATTTTAATAG
AAAAAGAAAGGATGAATAAA

Downstream 100 bases:

>100_bases
ATTTACATTAAGTTATTATGAGTATTAGAAGAACTTATTAAGGAGTGTATTAGTAGTTGTTTCTTATCTAAAAAGGATAG
GGTATTGGACTTAGTAGCTA

Product: orotidine 5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MIIDKLYENVEKKGCVCVGLDTDISYLPKGFLNKFTNIEDAIFAFNQRIVDSTFDVSACYKVQIAYYEAMGIKGMILYKK
TLEYIRKKGGIVIADIKRGDISATAKMYAKAHFEGDFESDFITLNPYMGMDTLEPYKDYFKNKEKGVFLLLRTSNEGSKD
IQYLDLKDNKKVYNKVGEKIENIGKEFLGNCGYSSIGAVVGCTAEENNIRKELKHTFFLIPGYGAQGGKAEVAKSYLSEG
NGGIVNSSRGILLAYKKYDEEGKNFEECARNEVINMKKTLQII

Sequences:

>Translated_283_residues
MIIDKLYENVEKKGCVCVGLDTDISYLPKGFLNKFTNIEDAIFAFNQRIVDSTFDVSACYKVQIAYYEAMGIKGMILYKK
TLEYIRKKGGIVIADIKRGDISATAKMYAKAHFEGDFESDFITLNPYMGMDTLEPYKDYFKNKEKGVFLLLRTSNEGSKD
IQYLDLKDNKKVYNKVGEKIENIGKEFLGNCGYSSIGAVVGCTAEENNIRKELKHTFFLIPGYGAQGGKAEVAKSYLSEG
NGGIVNSSRGILLAYKKYDEEGKNFEECARNEVINMKKTLQII
>Mature_283_residues
MIIDKLYENVEKKGCVCVGLDTDISYLPKGFLNKFTNIEDAIFAFNQRIVDSTFDVSACYKVQIAYYEAMGIKGMILYKK
TLEYIRKKGGIVIADIKRGDISATAKMYAKAHFEGDFESDFITLNPYMGMDTLEPYKDYFKNKEKGVFLLLRTSNEGSKD
IQYLDLKDNKKVYNKVGEKIENIGKEFLGNCGYSSIGAVVGCTAEENNIRKELKHTFFLIPGYGAQGGKAEVAKSYLSEG
NGGIVNSSRGILLAYKKYDEEGKNFEECARNEVINMKKTLQII

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 31858; Mature: 31858

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIDKLYENVEKKGCVCVGLDTDISYLPKGFLNKFTNIEDAIFAFNQRIVDSTFDVSACY
CCHHHHHHHHHHCCCEEEEECCCHHHCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEE
KVQIAYYEAMGIKGMILYKKTLEYIRKKGGIVIADIKRGDISATAKMYAKAHFEGDFESD
EEEEEEEECCCCCEEEEHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCC
FITLNPYMGMDTLEPYKDYFKNKEKGVFLLLRTSNEGSKDIQYLDLKDNKKVYNKVGEKI
EEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHH
ENIGKEFLGNCGYSSIGAVVGCTAEENNIRKELKHTFFLIPGYGAQGGKAEVAKSYLSEG
HHHHHHHHCCCCCCHHHHEEECCCCHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCC
NGGIVNSSRGILLAYKKYDEEGKNFEECARNEVINMKKTLQII
CCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHCHHHHHCCC
>Mature Secondary Structure
MIIDKLYENVEKKGCVCVGLDTDISYLPKGFLNKFTNIEDAIFAFNQRIVDSTFDVSACY
CCHHHHHHHHHHCCCEEEEECCCHHHCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEE
KVQIAYYEAMGIKGMILYKKTLEYIRKKGGIVIADIKRGDISATAKMYAKAHFEGDFESD
EEEEEEEECCCCCEEEEHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCC
FITLNPYMGMDTLEPYKDYFKNKEKGVFLLLRTSNEGSKDIQYLDLKDNKKVYNKVGEKI
EEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHH
ENIGKEFLGNCGYSSIGAVVGCTAEENNIRKELKHTFFLIPGYGAQGGKAEVAKSYLSEG
HHHHHHHHCCCCCCHHHHEEECCCCHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCC
NGGIVNSSRGILLAYKKYDEEGKNFEECARNEVINMKKTLQII
CCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA