| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170756216
Identifier: 170756216
GI number: 170756216
Start: 771084
End: 771758
Strand: Direct
Name: 170756216
Synonym: CLD_0111
Alternate gene names: NA
Gene position: 771084-771758 (Clockwise)
Preceding gene: 170757027
Following gene: 170754217
Centisome position: 19.48
GC content: 34.22
Gene sequence:
>675_bases ATGGATGAAAGTAAAGACAAGTCTAATATAGATGACAATGAAATAATAGAAGGGATAGATAAAAGTTTAAACTGTAAATG TCCAGAACCTACAGCACTAATGAAAGAATCATCAAATCTTCTATTTAGAGTACCTGTATGTTTGAGCCATCAAAGTAGAT TAAATGCAGTACAGCAGGAGTTTGTGGATGCCATAATCAGGGAAATTAGAAAAGCGCTACTCTTTCCAAGAACACTACCT GTAAGTGAACAATATCCAGAAACACCATTAGCGAATATCCGTAGAATGATTTTATCTAGTTATGGAATGGTATCACTTAA TTTGAAACAACGAAAAGTTAATCCTATTGAGAACAATCTTAATCAACCTATAGGGGAAACTGTTTGGGAGGAAAATCCCA TTGCACAAATTGAACCTTCAATGGCTTATCAATATGGACTACCCCTATTGCTAATTAGGGAAACAGGGGTAGAACAAACT GGAATTTGGTCTTTTGGAGTTGGACCATTTTTAATATTAGAATGGAATTCTACTGCATCAAACCCTATTGAAACTTTTTT TGCCAGAAATGATTGGAAGTCTATTTTTGAAAACTGGGTTGGTCAAGTAAGAACAGGCTATTATATTCAAACTCAACCAC AGTTTCGATACTCATGTCTTCATGATAATTTATAG
Upstream 100 bases:
>100_bases CACCCCTGATTAATTTAATCAGGGGTGTTTATGATTTATAACATGTAAACTTCTAATATTTCTTACATATTATATAGTGA GAAAGGGGGCAACTTTGAAT
Downstream 100 bases:
>100_bases TAGATCTAGATAAGACACTGTGAAAAAGATATTCTATAAGAGATTAGTTTATTGGAAGGTTCAACGGATTGTTCGTAAAG AGAATAAAAGAATAGTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MDESKDKSNIDDNEIIEGIDKSLNCKCPEPTALMKESSNLLFRVPVCLSHQSRLNAVQQEFVDAIIREIRKALLFPRTLP VSEQYPETPLANIRRMILSSYGMVSLNLKQRKVNPIENNLNQPIGETVWEENPIAQIEPSMAYQYGLPLLLIRETGVEQT GIWSFGVGPFLILEWNSTASNPIETFFARNDWKSIFENWVGQVRTGYYIQTQPQFRYSCLHDNL
Sequences:
>Translated_224_residues MDESKDKSNIDDNEIIEGIDKSLNCKCPEPTALMKESSNLLFRVPVCLSHQSRLNAVQQEFVDAIIREIRKALLFPRTLP VSEQYPETPLANIRRMILSSYGMVSLNLKQRKVNPIENNLNQPIGETVWEENPIAQIEPSMAYQYGLPLLLIRETGVEQT GIWSFGVGPFLILEWNSTASNPIETFFARNDWKSIFENWVGQVRTGYYIQTQPQFRYSCLHDNL >Mature_224_residues MDESKDKSNIDDNEIIEGIDKSLNCKCPEPTALMKESSNLLFRVPVCLSHQSRLNAVQQEFVDAIIREIRKALLFPRTLP VSEQYPETPLANIRRMILSSYGMVSLNLKQRKVNPIENNLNQPIGETVWEENPIAQIEPSMAYQYGLPLLLIRETGVEQT GIWSFGVGPFLILEWNSTASNPIETFFARNDWKSIFENWVGQVRTGYYIQTQPQFRYSCLHDNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25754; Mature: 25754
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDESKDKSNIDDNEIIEGIDKSLNCKCPEPTALMKESSNLLFRVPVCLSHQSRLNAVQQE CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEECCHHHCCHHHHHHHHHH FVDAIIREIRKALLFPRTLPVSEQYPETPLANIRRMILSSYGMVSLNLKQRKVNPIENNL HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECHHHCCCHHHHHC NQPIGETVWEENPIAQIEPSMAYQYGLPLLLIRETGVEQTGIWSFGVGPFLILEWNSTAS CCCHHHHHCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCEEECCCCEEEEEECCCCC NPIETFFARNDWKSIFENWVGQVRTGYYIQTQPQFRYSCLHDNL CHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCC >Mature Secondary Structure MDESKDKSNIDDNEIIEGIDKSLNCKCPEPTALMKESSNLLFRVPVCLSHQSRLNAVQQE CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEECCHHHCCHHHHHHHHHH FVDAIIREIRKALLFPRTLPVSEQYPETPLANIRRMILSSYGMVSLNLKQRKVNPIENNL HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECHHHCCCHHHHHC NQPIGETVWEENPIAQIEPSMAYQYGLPLLLIRETGVEQTGIWSFGVGPFLILEWNSTAS CCCHHHHHCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCEEECCCCEEEEEECCCCC NPIETFFARNDWKSIFENWVGQVRTGYYIQTQPQFRYSCLHDNL CHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA