Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is cheC

Identifier: 170756124

GI number: 170756124

Start: 2915786

End: 2916385

Strand: Reverse

Name: cheC

Synonym: CLD_1827

Alternate gene names: 170756124

Gene position: 2916385-2915786 (Counterclockwise)

Preceding gene: 170755986

Following gene: 170757287

Centisome position: 73.68

GC content: 32.83

Gene sequence:

>600_bases
ATGGATTACAATAGTATGACGCCTCTTCAATTAGATGCACTTAAGGAAGTATCTAATATAGGAACAGGAAATGCCGCTAC
AGCATTATCACAGCTTTTAGGTAGAAAAATAGATATGAATGTACCGGATATAAATATAGTTCCTTTTGAAGAGGTAATGG
AAGAAATAGGAGATGAGAAAGTAGCTGTAGGAGTATTAGTAAGAGTATTAGGAGATACTCCTGGGAATATATTGTTTGTA
TTTGAAAAAAGTACAGCATTAGATTTAGTTCATAGATTAACTGGCATGCAAGAGGAAGAATTAAGTGAGATGGGAAATTC
AGTAATGTGTGAAATAGGAAATATAATATCCGCTTCATATATGAATGCTATAGCCAGATTCACTAATTTAACCATAACAC
CATCCGTTCCGGCAGTATCATATGATATGTTAGGGGCAATATTGTCTACTACTTTTATAGAAGCAGGACAATACAATGAA
CATGTTTTGGATATTGAAACTGTATTCAAAGAGGATGGATCAGAAATAAGTGGGCATTTTTATTACATACCAATGCCTGG
TTCATTAGAAAAAATATTAAATACATTAGGAGTAAGTTAA

Upstream 100 bases:

>100_bases
AAAGAATATATAGGAGCAACCATATTAGGAGATGGACTTGTAACATTAATCTTAGACGTGGCAGCTTTAGTATGATAAAA
TCATAGGAGGGCTTATATAT

Downstream 100 bases:

>100_bases
TTTGTATTAATTTGGAGGGAAAGAAAAATGGCAAAAGTATTAATCGTTGATGACGCTGCATTTATGAGAATGATGATAAA
AGATATATTAGAAAAGAATG

Product: chemotaxis protein CheC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MDYNSMTPLQLDALKEVSNIGTGNAATALSQLLGRKIDMNVPDINIVPFEEVMEEIGDEKVAVGVLVRVLGDTPGNILFV
FEKSTALDLVHRLTGMQEEELSEMGNSVMCEIGNIISASYMNAIARFTNLTITPSVPAVSYDMLGAILSTTFIEAGQYNE
HVLDIETVFKEDGSEISGHFYYIPMPGSLEKILNTLGVS

Sequences:

>Translated_199_residues
MDYNSMTPLQLDALKEVSNIGTGNAATALSQLLGRKIDMNVPDINIVPFEEVMEEIGDEKVAVGVLVRVLGDTPGNILFV
FEKSTALDLVHRLTGMQEEELSEMGNSVMCEIGNIISASYMNAIARFTNLTITPSVPAVSYDMLGAILSTTFIEAGQYNE
HVLDIETVFKEDGSEISGHFYYIPMPGSLEKILNTLGVS
>Mature_199_residues
MDYNSMTPLQLDALKEVSNIGTGNAATALSQLLGRKIDMNVPDINIVPFEEVMEEIGDEKVAVGVLVRVLGDTPGNILFV
FEKSTALDLVHRLTGMQEEELSEMGNSVMCEIGNIISASYMNAIARFTNLTITPSVPAVSYDMLGAILSTTFIEAGQYNE
HVLDIETVFKEDGSEISGHFYYIPMPGSLEKILNTLGVS

Specific function: Involved in restoring normal CheY-P levels following the addition of attractant by increasing the rate of CheY-P hydrolysis. Is only 6% as active as FliY, which indicates that CheC may function after addition of an attractant to cope with increased levels

COG id: COG1776

COG function: function code NT; Chemotaxis protein CheC, inhibitor of MCP methylation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007597 [H]

Pfam domain/function: PF04509 CheC [H]

EC number: NA

Molecular weight: Translated: 21640; Mature: 21640

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYNSMTPLQLDALKEVSNIGTGNAATALSQLLGRKIDMNVPDINIVPFEEVMEEIGDEK
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHCCCH
VAVGVLVRVLGDTPGNILFVFEKSTALDLVHRLTGMQEEELSEMGNSVMCEIGNIISASY
HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHH
MNAIARFTNLTITPSVPAVSYDMLGAILSTTFIEAGQYNEHVLDIETVFKEDGSEISGHF
HHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEE
YYIPMPGSLEKILNTLGVS
EEEECCCCHHHHHHHHCCC
>Mature Secondary Structure
MDYNSMTPLQLDALKEVSNIGTGNAATALSQLLGRKIDMNVPDINIVPFEEVMEEIGDEK
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHCCCH
VAVGVLVRVLGDTPGNILFVFEKSTALDLVHRLTGMQEEELSEMGNSVMCEIGNIISASY
HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHH
MNAIARFTNLTITPSVPAVSYDMLGAILSTTFIEAGQYNEHVLDIETVFKEDGSEISGHF
HHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEE
YYIPMPGSLEKILNTLGVS
EEEECCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2832368; 9384377 [H]