Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756075

Identifier: 170756075

GI number: 170756075

Start: 2315726

End: 2316589

Strand: Reverse

Name: 170756075

Synonym: CLD_2461

Alternate gene names: NA

Gene position: 2316589-2315726 (Counterclockwise)

Preceding gene: 170755286

Following gene: 170757286

Centisome position: 58.53

GC content: 25.69

Gene sequence:

>864_bases
TTGGATATTAAATTAACACTTAAAAGTAATAATAAAATATTAGAAATAGCTAAAGATTATAAACTTTTCGATATAGAAGG
TATAGAAACGGCAGAGTTTGAATTAAATATAGTTAATAATGCAAATTTAGATGGTTCTTCTGTAATTAGTAAAAGAATAC
AAAAAAGACCAATATCTATAAGTGTAGATTATAAGGGAGAGAATAAAGAGATTGAACGTCAAAAGTTAATCTCTTTTTTT
AATCCTAAAAACATAGGTGTTTTGATAGTGGAATATGGAGATGTTAAAAGGTCAATAGAGTATGAAATAGAAAATTTTAA
ATCTAAACTTACTAATGTTTATGATGACTTATCTTTCACAGTAGATTTAATTTGTCCTAATCCATTTTGGACAAATGTAG
AGCTTAATAAAAAACAAATAGCATTATGGAAAGGTGATTTTCATTTCCCTTTAGTAATTCCAATTAATAAAGGTATTACT
ATGGGACATAGAGAACCTTCCTTAATAGTTAATGTGCTAAATAATGGACAAGTAAAAACAGGAATGATAATAGAATTTTT
TGCAAGGGGTACTTTAAGTAATCCAAGTTTATTTAATGTTAATACTAGAGAATTTATAAAAATAAATAAAGGAATGGTTG
CAGGAGAAAAATTTATAATAAACACTAATTATAGTAAGAAAAAAATATTACAAGATCTTAATGGTGTTACAACAGATATA
TTAAATTATTTAGACATTGTAGGTGGAGGAGATACTTTCCTACAACTAGATATTGGAGATAATTTATTCCGTTACAATGC
AGATAGTAATTTGGATAATCTAGAGGTTAATATATATTTTAGTCCACAATATTTGGGGGTGTAA

Upstream 100 bases:

>100_bases
AATGATAATGGAGTAACTCAAATTAATAATTTTAATCAACCAGTTAAATCTCCATCCGAAACCGCTAGAGCACTTAAAAG
AGTTGGGAGGGATTTAGCCC

Downstream 100 bases:

>100_bases
AAGATTAAGAATATAACACAATTAGAGTTAACTATAGACTATCTAGAAGATGCTTTTTATTATTTAGATAAAGTAAAAGA
GTCTTGTCCTAAAGATGATG

Product: phage related protein

Products: NA

Alternate protein names: Phage Tail Protein; Phage-Related Tail Protein; Phage-Related Protein; Tail Protein; Tail Component Family Protein

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MDIKLTLKSNNKILEIAKDYKLFDIEGIETAEFELNIVNNANLDGSSVISKRIQKRPISISVDYKGENKEIERQKLISFF
NPKNIGVLIVEYGDVKRSIEYEIENFKSKLTNVYDDLSFTVDLICPNPFWTNVELNKKQIALWKGDFHFPLVIPINKGIT
MGHREPSLIVNVLNNGQVKTGMIIEFFARGTLSNPSLFNVNTREFIKINKGMVAGEKFIINTNYSKKKILQDLNGVTTDI
LNYLDIVGGGDTFLQLDIGDNLFRYNADSNLDNLEVNIYFSPQYLGV

Sequences:

>Translated_287_residues
MDIKLTLKSNNKILEIAKDYKLFDIEGIETAEFELNIVNNANLDGSSVISKRIQKRPISISVDYKGENKEIERQKLISFF
NPKNIGVLIVEYGDVKRSIEYEIENFKSKLTNVYDDLSFTVDLICPNPFWTNVELNKKQIALWKGDFHFPLVIPINKGIT
MGHREPSLIVNVLNNGQVKTGMIIEFFARGTLSNPSLFNVNTREFIKINKGMVAGEKFIINTNYSKKKILQDLNGVTTDI
LNYLDIVGGGDTFLQLDIGDNLFRYNADSNLDNLEVNIYFSPQYLGV
>Mature_287_residues
MDIKLTLKSNNKILEIAKDYKLFDIEGIETAEFELNIVNNANLDGSSVISKRIQKRPISISVDYKGENKEIERQKLISFF
NPKNIGVLIVEYGDVKRSIEYEIENFKSKLTNVYDDLSFTVDLICPNPFWTNVELNKKQIALWKGDFHFPLVIPINKGIT
MGHREPSLIVNVLNNGQVKTGMIIEFFARGTLSNPSLFNVNTREFIKINKGMVAGEKFIINTNYSKKKILQDLNGVTTDI
LNYLDIVGGGDTFLQLDIGDNLFRYNADSNLDNLEVNIYFSPQYLGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32660; Mature: 32660

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKLTLKSNNKILEIAKDYKLFDIEGIETAEFELNIVNNANLDGSSVISKRIQKRPISI
CCEEEEEECCCEEEEEECCCEEEEECCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCEE
SVDYKGENKEIERQKLISFFNPKNIGVLIVEYGDVKRSIEYEIENFKSKLTNVYDDLSFT
EEEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEE
VDLICPNPFWTNVELNKKQIALWKGDFHFPLVIPINKGITMGHREPSLIVNVLNNGQVKT
EEEEECCCCCCCEEECCEEEEEEECCCCEEEEEECCCCEEECCCCCEEEEEEECCCCEEE
GMIIEFFARGTLSNPSLFNVNTREFIKINKGMVAGEKFIINTNYSKKKILQDLNGVTTDI
CEEEEEEECCCCCCCEEEECCCHHEEEECCCEEECCEEEEECCCCHHHHHHHHCCHHHHH
LNYLDIVGGGDTFLQLDIGDNLFRYNADSNLDNLEVNIYFSPQYLGV
HHHHHHCCCCCEEEEEECCCCEEEECCCCCCCEEEEEEEECCEECCC
>Mature Secondary Structure
MDIKLTLKSNNKILEIAKDYKLFDIEGIETAEFELNIVNNANLDGSSVISKRIQKRPISI
CCEEEEEECCCEEEEEECCCEEEEECCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCEE
SVDYKGENKEIERQKLISFFNPKNIGVLIVEYGDVKRSIEYEIENFKSKLTNVYDDLSFT
EEEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEE
VDLICPNPFWTNVELNKKQIALWKGDFHFPLVIPINKGITMGHREPSLIVNVLNNGQVKT
EEEEECCCCCCCEEECCEEEEEEECCCCEEEEEECCCCEEECCCCCEEEEEEECCCCEEE
GMIIEFFARGTLSNPSLFNVNTREFIKINKGMVAGEKFIINTNYSKKKILQDLNGVTTDI
CEEEEEEECCCCCCCEEEECCCHHEEEECCCEEECCEEEEECCCCHHHHHHHHCCHHHHH
LNYLDIVGGGDTFLQLDIGDNLFRYNADSNLDNLEVNIYFSPQYLGV
HHHHHHCCCCCEEEEEECCCCEEEECCCCCCCEEEEEEEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA