Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170757286

Identifier: 170757286

GI number: 170757286

Start: 2314373

End: 2315530

Strand: Reverse

Name: 170757286

Synonym: CLD_2462

Alternate gene names: NA

Gene position: 2315530-2314373 (Counterclockwise)

Preceding gene: 170756075

Following gene: 170755419

Centisome position: 58.5

GC content: 27.72

Gene sequence:

>1158_bases
TTGGAGTTATATATATTTAACAGGGATTTAGAATTAATAGGCATATTAGATACTTTTACCTCTTTAAGGTGGATTAGGAG
GTATTTTAAAAGTGGAGAATTTGAATTACATTGTGCTTTAGATTCTAATACCTTAGAATTGTTAAAAAGAGATAATGTAG
TTTATAAAAAAAATGATGTTGAAGCTGGTTATATAGAAACTAGGCAATTAAAAATAGGAGAAGATGGACAAGAATACCTA
GAAGTTAAAGGTAAGTTTTTAACTAATTATTTAGATAGGCGTATTAGTTGGGATAGAGTTAATTTTTCTGGAAAGACAGA
AGAATTAATGAGGAAACTAGTCAATGATAATGCTATTAATCCAGTTAATATAAATAGAAAAATTCCAAATTTAATTTTAG
GGAATTTAAAAGGATTTACAGAAGATATTAAATATCCAAACAGCTTTGGAAATATATTAGAGCAATTAGAAAATATAAGT
AATACGAATAACTTAGGATATAGAAATATATTAGATATAAAAAGTAGATTAATTAAATTTGATGTATATAAGGGTGTTGA
TAGAACCTTAAATAATGGGACTATAGCACCTTGTATTTTTAGTAGAGATTTCGAAAATATATTAGAACAAGAATACACAG
ATAGTTTAAATAATTATAGAAATACAACATTGATAGCTGGTGCTGGAGAAGGTAAGGATAGAAAAATAACATCTATAGAA
GAAGGTGCTGGACTTGATAGATATGAATTATATGTAGATGCAAGAGATATACAAGATACAGAAACTGTTACAGTTACAGT
AACTGATTATGATGAAGAAGGTAATGTTACGGGAGAACATGAAGAAGATCAAGAAGTAGAAATTCCTTGGGAGAGATACG
AGCCACAGTTATTACAGAGAGGTAATGAAAAATTAGAAGAATGTTCTGAAATACAAACATTTGATAGTAAGATAAATACA
TTGGGTAATAACAAATATAAAAAAGATTATGATCTAGGAGACATAGTAACTGTTGTAGATAAAAATTGGAGAATAAGAAT
AGATACAAGAATAACAGAAATAGAGGAAGCTTATGAGGAAAAAGGATTCGAGGTTAATGTTACTTTTGGTAACAACATTC
CAACTATTATAGATAAAATTAAGCAAACAGTGAGGTGA

Upstream 100 bases:

>100_bases
TGATGAGAATTATGAAATAATAAATATTGCAATAAAAAATTTAAACAATGCTCATAATAATATTTTTAATAGATTAAGAG
AGTAAAAGAGGTGAGTATTA

Downstream 100 bases:

>100_bases
TAATATATGATAAAAAGTTTTCCTTTTAATGCTGTTTATGATGCTAATGGCGTTCCAGATAGAGCATATTTGGCAGAAGA
TTTCGCTCGATACTTTGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Minor Protein N- Region

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MELYIFNRDLELIGILDTFTSLRWIRRYFKSGEFELHCALDSNTLELLKRDNVVYKKNDVEAGYIETRQLKIGEDGQEYL
EVKGKFLTNYLDRRISWDRVNFSGKTEELMRKLVNDNAINPVNINRKIPNLILGNLKGFTEDIKYPNSFGNILEQLENIS
NTNNLGYRNILDIKSRLIKFDVYKGVDRTLNNGTIAPCIFSRDFENILEQEYTDSLNNYRNTTLIAGAGEGKDRKITSIE
EGAGLDRYELYVDARDIQDTETVTVTVTDYDEEGNVTGEHEEDQEVEIPWERYEPQLLQRGNEKLEECSEIQTFDSKINT
LGNNKYKKDYDLGDIVTVVDKNWRIRIDTRITEIEEAYEEKGFEVNVTFGNNIPTIIDKIKQTVR

Sequences:

>Translated_385_residues
MELYIFNRDLELIGILDTFTSLRWIRRYFKSGEFELHCALDSNTLELLKRDNVVYKKNDVEAGYIETRQLKIGEDGQEYL
EVKGKFLTNYLDRRISWDRVNFSGKTEELMRKLVNDNAINPVNINRKIPNLILGNLKGFTEDIKYPNSFGNILEQLENIS
NTNNLGYRNILDIKSRLIKFDVYKGVDRTLNNGTIAPCIFSRDFENILEQEYTDSLNNYRNTTLIAGAGEGKDRKITSIE
EGAGLDRYELYVDARDIQDTETVTVTVTDYDEEGNVTGEHEEDQEVEIPWERYEPQLLQRGNEKLEECSEIQTFDSKINT
LGNNKYKKDYDLGDIVTVVDKNWRIRIDTRITEIEEAYEEKGFEVNVTFGNNIPTIIDKIKQTVR
>Mature_385_residues
MELYIFNRDLELIGILDTFTSLRWIRRYFKSGEFELHCALDSNTLELLKRDNVVYKKNDVEAGYIETRQLKIGEDGQEYL
EVKGKFLTNYLDRRISWDRVNFSGKTEELMRKLVNDNAINPVNINRKIPNLILGNLKGFTEDIKYPNSFGNILEQLENIS
NTNNLGYRNILDIKSRLIKFDVYKGVDRTLNNGTIAPCIFSRDFENILEQEYTDSLNNYRNTTLIAGAGEGKDRKITSIE
EGAGLDRYELYVDARDIQDTETVTVTVTDYDEEGNVTGEHEEDQEVEIPWERYEPQLLQRGNEKLEECSEIQTFDSKINT
LGNNKYKKDYDLGDIVTVVDKNWRIRIDTRITEIEEAYEEKGFEVNVTFGNNIPTIIDKIKQTVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44820; Mature: 44820

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELYIFNRDLELIGILDTFTSLRWIRRYFKSGEFELHCALDSNTLELLKRDNVVYKKNDV
CEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHCCCEEEECCCC
EAGYIETRQLKIGEDGQEYLEVKGKFLTNYLDRRISWDRVNFSGKTEELMRKLVNDNAIN
CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCC
PVNINRKIPNLILGNLKGFTEDIKYPNSFGNILEQLENISNTNNLGYRNILDIKSRLIKF
CCCCCCCCCHHHHHCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
DVYKGVDRTLNNGTIAPCIFSRDFENILEQEYTDSLNNYRNTTLIAGAGEGKDRKITSIE
HHHHCHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEECCHH
EGAGLDRYELYVDARDIQDTETVTVTVTDYDEEGNVTGEHEEDQEVEIPWERYEPQLLQR
CCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCHHHHHC
GNEKLEECSEIQTFDSKINTLGNNKYKKDYDLGDIVTVVDKNWRIRIDTRITEIEEAYEE
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEECHHHHHHHHHHH
KGFEVNVTFGNNIPTIIDKIKQTVR
CCCEEEEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure
MELYIFNRDLELIGILDTFTSLRWIRRYFKSGEFELHCALDSNTLELLKRDNVVYKKNDV
CEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHCCCEEEECCCC
EAGYIETRQLKIGEDGQEYLEVKGKFLTNYLDRRISWDRVNFSGKTEELMRKLVNDNAIN
CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCC
PVNINRKIPNLILGNLKGFTEDIKYPNSFGNILEQLENISNTNNLGYRNILDIKSRLIKF
CCCCCCCCCHHHHHCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
DVYKGVDRTLNNGTIAPCIFSRDFENILEQEYTDSLNNYRNTTLIAGAGEGKDRKITSIE
HHHHCHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEECCHH
EGAGLDRYELYVDARDIQDTETVTVTVTDYDEEGNVTGEHEEDQEVEIPWERYEPQLLQR
CCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCHHHHHC
GNEKLEECSEIQTFDSKINTLGNNKYKKDYDLGDIVTVVDKNWRIRIDTRITEIEEAYEE
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEECHHHHHHHHHHH
KGFEVNVTFGNNIPTIIDKIKQTVR
CCCEEEEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA