Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170756019

Identifier: 170756019

GI number: 170756019

Start: 1544259

End: 1545437

Strand: Direct

Name: 170756019

Synonym: CLD_3157

Alternate gene names: NA

Gene position: 1544259-1545437 (Clockwise)

Preceding gene: 170756828

Following gene: 170754759

Centisome position: 39.01

GC content: 22.48

Gene sequence:

>1179_bases
GTGAGATTAAAAGCATTTATAAAACTAACATTAAAATCTGTATTTAGAGAATTACCTGTTATGATATTTACTTTTGCAAT
ATTTCCTATAGTTATAAGTTCATTGCATGGATATTTTCAAAAGGATATGTTTAATCCTAAAAATCAAATAGATAGAATAG
CAATTTATGTAGAGGATAAAGATAATTCAAAATTATCTAATGAATTTATAAAATTTTTGGGAAGTAATGGGTTAGAGAAA
TTTATAGATATTAAAAAAAATAAGGAAAAAGCTATAGAGGAAGTAATAATTCCAAAGGGATATGAAAAAAGCATTATAGA
AGATAAAGAAATTGCAATAAAAATAAATGAAAGAGAAAAAGATAAGGAAATATCCTCAAAAATACTAAAGGATTTAATAG
ATAATTATAATAAAGAAGTGAAAAATAATCTTACAATAGGAAACAACATAAATAAAATGGATATTTCTAAAGAAAAAAAG
GATCTATTAGTAAAGAAAATATCAAAAGATATTACTAAAATATATAAAAAGGATGCTATAAGAAATACCATAGTTAAAAG
TACAAGGAATTTAACTTCCTATGAGTACTATTCAGTATCCATATTAAGTTTTATGTTTATAGTAACTATAATGTCGTTGT
GTAATGGGTATTATTCAGAAAAGAAAAATGGTATTTTTCAAAGAACATTATCTACAAGTATAAGTAAGGTTGAATATTTT
AATTATTCATTAGTTTCTTGGTATATTTTTGCTATTTTATTTAATTCCATATATGTATTGTCTTATAGATTTTTAGGATT
ATCTTTTAAAGGTAATATAGGACTTTTATTATTAATAGTGCTTACCAAAAGTCTTTTAGAAGTGGCTATATCCTCTGTAG
TGATAGCCTTCTTTAAGGAACAAAAGATGGCAGCAATATTTTTAAATACAGTTATTATAATAAGTGTAAGTTTAGGTGGA
GTATTTTATCCATTAGAGAAAGTTATTAATAGTTTTAATAAAATATTTAGGGTTATAAGTGATTTTGCACCTAATGTACT
TATTATAAAAACCTATAAAAGCTTTTTAATTTATAATTCCTTTGAAGCTATTAAATATTATCTAATTACATTTATTCTTA
TTTCTATGGTTTTATATAGTATTAGTCTTTTAAAGATTAATATGAAATGGGGGGATTAA

Upstream 100 bases:

>100_bases
TTAATATTAATAAATTAGATTGTTAATGCAGGAAATTTATATATTTAAAATATTGAAATGAGAAATTTATAAATTAAATT
TTATATAGGGAGGGAAGAAT

Downstream 100 bases:

>100_bases
CATGAAAATTTTAAGATATGGATTTATACAATTCAAAAGAATGATAAAAGATATAAAAGTTATAGGTTTTATGCTTATTA
TGCCCCTAGTAGTAATAACC

Product: putative ABC transporter, permease protein

Products: NA

Alternate protein names: Permease; ABC Transporter Permease

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MRLKAFIKLTLKSVFRELPVMIFTFAIFPIVISSLHGYFQKDMFNPKNQIDRIAIYVEDKDNSKLSNEFIKFLGSNGLEK
FIDIKKNKEKAIEEVIIPKGYEKSIIEDKEIAIKINEREKDKEISSKILKDLIDNYNKEVKNNLTIGNNINKMDISKEKK
DLLVKKISKDITKIYKKDAIRNTIVKSTRNLTSYEYYSVSILSFMFIVTIMSLCNGYYSEKKNGIFQRTLSTSISKVEYF
NYSLVSWYIFAILFNSIYVLSYRFLGLSFKGNIGLLLLIVLTKSLLEVAISSVVIAFFKEQKMAAIFLNTVIIISVSLGG
VFYPLEKVINSFNKIFRVISDFAPNVLIIKTYKSFLIYNSFEAIKYYLITFILISMVLYSISLLKINMKWGD

Sequences:

>Translated_392_residues
MRLKAFIKLTLKSVFRELPVMIFTFAIFPIVISSLHGYFQKDMFNPKNQIDRIAIYVEDKDNSKLSNEFIKFLGSNGLEK
FIDIKKNKEKAIEEVIIPKGYEKSIIEDKEIAIKINEREKDKEISSKILKDLIDNYNKEVKNNLTIGNNINKMDISKEKK
DLLVKKISKDITKIYKKDAIRNTIVKSTRNLTSYEYYSVSILSFMFIVTIMSLCNGYYSEKKNGIFQRTLSTSISKVEYF
NYSLVSWYIFAILFNSIYVLSYRFLGLSFKGNIGLLLLIVLTKSLLEVAISSVVIAFFKEQKMAAIFLNTVIIISVSLGG
VFYPLEKVINSFNKIFRVISDFAPNVLIIKTYKSFLIYNSFEAIKYYLITFILISMVLYSISLLKINMKWGD
>Mature_392_residues
MRLKAFIKLTLKSVFRELPVMIFTFAIFPIVISSLHGYFQKDMFNPKNQIDRIAIYVEDKDNSKLSNEFIKFLGSNGLEK
FIDIKKNKEKAIEEVIIPKGYEKSIIEDKEIAIKINEREKDKEISSKILKDLIDNYNKEVKNNLTIGNNINKMDISKEKK
DLLVKKISKDITKIYKKDAIRNTIVKSTRNLTSYEYYSVSILSFMFIVTIMSLCNGYYSEKKNGIFQRTLSTSISKVEYF
NYSLVSWYIFAILFNSIYVLSYRFLGLSFKGNIGLLLLIVLTKSLLEVAISSVVIAFFKEQKMAAIFLNTVIIISVSLGG
VFYPLEKVINSFNKIFRVISDFAPNVLIIKTYKSFLIYNSFEAIKYYLITFILISMVLYSISLLKINMKWGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45406; Mature: 45406

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKAFIKLTLKSVFRELPVMIFTFAIFPIVISSLHGYFQKDMFNPKNQIDRIAIYVEDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
DNSKLSNEFIKFLGSNGLEKFIDIKKNKEKAIEEVIIPKGYEKSIIEDKEIAIKINEREK
CCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHCCCCEEEEEECCCHH
DKEISSKILKDLIDNYNKEVKNNLTIGNNINKMDISKEKKDLLVKKISKDITKIYKKDAI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RNTIVKSTRNLTSYEYYSVSILSFMFIVTIMSLCNGYYSEKKNGIFQRTLSTSISKVEYF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHH
NYSLVSWYIFAILFNSIYVLSYRFLGLSFKGNIGLLLLIVLTKSLLEVAISSVVIAFFKE
HHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKMAAIFLNTVIIISVSLGGVFYPLEKVINSFNKIFRVISDFAPNVLIIKTYKSFLIYNS
HHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHH
FEAIKYYLITFILISMVLYSISLLKINMKWGD
HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
>Mature Secondary Structure
MRLKAFIKLTLKSVFRELPVMIFTFAIFPIVISSLHGYFQKDMFNPKNQIDRIAIYVEDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
DNSKLSNEFIKFLGSNGLEKFIDIKKNKEKAIEEVIIPKGYEKSIIEDKEIAIKINEREK
CCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHCCCCEEEEEECCCHH
DKEISSKILKDLIDNYNKEVKNNLTIGNNINKMDISKEKKDLLVKKISKDITKIYKKDAI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RNTIVKSTRNLTSYEYYSVSILSFMFIVTIMSLCNGYYSEKKNGIFQRTLSTSISKVEYF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHH
NYSLVSWYIFAILFNSIYVLSYRFLGLSFKGNIGLLLLIVLTKSLLEVAISSVVIAFFKE
HHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKMAAIFLNTVIIISVSLGGVFYPLEKVINSFNKIFRVISDFAPNVLIIKTYKSFLIYNS
HHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHH
FEAIKYYLITFILISMVLYSISLLKINMKWGD
HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA