Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755908

Identifier: 170755908

GI number: 170755908

Start: 2167161

End: 2168441

Strand: Reverse

Name: 170755908

Synonym: CLD_2606

Alternate gene names: NA

Gene position: 2168441-2167161 (Counterclockwise)

Preceding gene: 170756302

Following gene: 170756143

Centisome position: 54.78

GC content: 29.59

Gene sequence:

>1281_bases
TTGGAGAAAAGCAATTTAAAGTATGGCAATGAATATAAAAAAATACTATTTAAGCCTAGTCATAATGTAGGGATTCTAGA
TAAAGAATTCTTATCCATAGAAAAGGAAGAGGAAGTTATAAAAAGGGCTCTCTTGAATCCTATAGGATCTAGAAGAATAA
ATGAACTTATTACTCCGGAAGATAAGCTTTGCATTGTGATATCTGATGTAACGAGACTATGGCAAAAACCTAGGGTTTTT
TTACCTATACTTATTGAAGAAATAAAAAAAAGTGGTATAAAGGATGAAAATATAATTTTCTTATGTGCCTTAGGTTCCCA
TAGAAAACAAAGCAAAGAGGAACATATAAAGATTTTAGGGGAGAATTTATTTAAAAAATTTAAAATTATAGATCATTATT
CCAAAACTAAAGATGAAATGGTGTATATAGGTGAAACCTCTTTTAAAACTCCTGTATTTGTTAATAAGCTAGTAAAAGAG
TGTACTAAAGTAATTATTACAGGAGGTATAACCTTTCATGATATGGCAGGATTCGGAGGGGGAAGAAAATCTATTTTACC
TGGCATAAGTTCCTACGAAACCATAATGGCAAATCATGCATTAGTTCTAAATCCTAATAAAAATGGCATAAATCCTAATT
GTAGCTGCGGAAATTTAGAAAATAATCCTATGCATTTAGATATGATGGAGGCTTGTGATATGATAAAACCTTCATTTTTA
TTAAATGTAATAATGGATTCTAAGGGTAATATTACTGAAGCAGTTGCAGGAAATTATGCAAAAGCCTTTGAAAGAGGGTG
TGAACTTTTGCAAGAAAACAATGGTTTAAAAATTAAAAAATTGAAGGATACAGTGATTGTTTCTGCTGGAGGATTTCCAA
AGGACATTAACTTGTATCAATCCTCTAAAGCATTAAGTAATGCAAAAGAAGCAGTTAAAAAAGGTGGAAAAATAATTCTT
TTTACACAATGCATAGAGGGTATAGGAAATAAAGAAGTAGAGGAAATCATAAATAATTTTAATAACAATGAAGAAAGGGA
AGAGGAATTAAGAAGAAAGTTTACTGTTTCAAAGTTTGCAGCCTACTTAATATGTAGTATTGCCAAAGAATATGAGCTTA
TTCTTATATCCGATATAAAAGAAGAACTAGTTAGTAAAGCCGGAATTAGGGTATTTGAAGATGAGAGTATAATAAATGAA
ATTTTAAAGGAAAATGAAGAAATATATCTGATGCCAGATGGTAGTAGTTTATTACCTAAATATTCTAATATACAAAAATA
G

Upstream 100 bases:

>100_bases
ACATGTATAAATATTCATTGTATAATTTTAAAAATTAACATATACAAACCAAAACAGGATAGATATATACATATAATTCT
AGAGAAGTGGGGGTGTTTAT

Downstream 100 bases:

>100_bases
TTAAAAATTTACATAAAATACAAATCATAATAAAAAATCCATATGCATAATTATACAGAAAATAATAAATAAGGAGTGAA
TAGAAATGAGTAAAAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MEKSNLKYGNEYKKILFKPSHNVGILDKEFLSIEKEEEVIKRALLNPIGSRRINELITPEDKLCIVISDVTRLWQKPRVF
LPILIEEIKKSGIKDENIIFLCALGSHRKQSKEEHIKILGENLFKKFKIIDHYSKTKDEMVYIGETSFKTPVFVNKLVKE
CTKVIITGGITFHDMAGFGGGRKSILPGISSYETIMANHALVLNPNKNGINPNCSCGNLENNPMHLDMMEACDMIKPSFL
LNVIMDSKGNITEAVAGNYAKAFERGCELLQENNGLKIKKLKDTVIVSAGGFPKDINLYQSSKALSNAKEAVKKGGKIIL
FTQCIEGIGNKEVEEIINNFNNNEEREEELRRKFTVSKFAAYLICSIAKEYELILISDIKEELVSKAGIRVFEDESIINE
ILKENEEIYLMPDGSSLLPKYSNIQK

Sequences:

>Translated_426_residues
MEKSNLKYGNEYKKILFKPSHNVGILDKEFLSIEKEEEVIKRALLNPIGSRRINELITPEDKLCIVISDVTRLWQKPRVF
LPILIEEIKKSGIKDENIIFLCALGSHRKQSKEEHIKILGENLFKKFKIIDHYSKTKDEMVYIGETSFKTPVFVNKLVKE
CTKVIITGGITFHDMAGFGGGRKSILPGISSYETIMANHALVLNPNKNGINPNCSCGNLENNPMHLDMMEACDMIKPSFL
LNVIMDSKGNITEAVAGNYAKAFERGCELLQENNGLKIKKLKDTVIVSAGGFPKDINLYQSSKALSNAKEAVKKGGKIIL
FTQCIEGIGNKEVEEIINNFNNNEEREEELRRKFTVSKFAAYLICSIAKEYELILISDIKEELVSKAGIRVFEDESIINE
ILKENEEIYLMPDGSSLLPKYSNIQK
>Mature_426_residues
MEKSNLKYGNEYKKILFKPSHNVGILDKEFLSIEKEEEVIKRALLNPIGSRRINELITPEDKLCIVISDVTRLWQKPRVF
LPILIEEIKKSGIKDENIIFLCALGSHRKQSKEEHIKILGENLFKKFKIIDHYSKTKDEMVYIGETSFKTPVFVNKLVKE
CTKVIITGGITFHDMAGFGGGRKSILPGISSYETIMANHALVLNPNKNGINPNCSCGNLENNPMHLDMMEACDMIKPSFL
LNVIMDSKGNITEAVAGNYAKAFERGCELLQENNGLKIKKLKDTVIVSAGGFPKDINLYQSSKALSNAKEAVKKGGKIIL
FTQCIEGIGNKEVEEIINNFNNNEEREEELRRKFTVSKFAAYLICSIAKEYELILISDIKEELVSKAGIRVFEDESIINE
ILKENEEIYLMPDGSSLLPKYSNIQK

Specific function: Unknown

COG id: COG3875

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48118; Mature: 48118

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKSNLKYGNEYKKILFKPSHNVGILDKEFLSIEKEEEVIKRALLNPIGSRRINELITPE
CCCCCCCCCCHHHHEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCC
DKLCIVISDVTRLWQKPRVFLPILIEEIKKSGIKDENIIFLCALGSHRKQSKEEHIKILG
CCEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
ENLFKKFKIIDHYSKTKDEMVYIGETSFKTPVFVNKLVKECTKVIITGGITFHDMAGFGG
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHCCCCC
GRKSILPGISSYETIMANHALVLNPNKNGINPNCSCGNLENNPMHLDMMEACDMIKPSFL
CCHHHCCCCHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCHHHH
LNVIMDSKGNITEAVAGNYAKAFERGCELLQENNGLKIKKLKDTVIVSAGGFPKDINLYQ
HHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCCCCHHHH
SSKALSNAKEAVKKGGKIILFTQCIEGIGNKEVEEIINNFNNNEEREEELRRKFTVSKFA
HHHHHHHHHHHHHCCCCEEEEHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AYLICSIAKEYELILISDIKEELVSKAGIRVFEDESIINEILKENEEIYLMPDGSSLLPK
HHHHHHHHHCCCEEEHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCEEEEEECCCCCCCC
YSNIQK
CCCCCC
>Mature Secondary Structure
MEKSNLKYGNEYKKILFKPSHNVGILDKEFLSIEKEEEVIKRALLNPIGSRRINELITPE
CCCCCCCCCCHHHHEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCC
DKLCIVISDVTRLWQKPRVFLPILIEEIKKSGIKDENIIFLCALGSHRKQSKEEHIKILG
CCEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
ENLFKKFKIIDHYSKTKDEMVYIGETSFKTPVFVNKLVKECTKVIITGGITFHDMAGFGG
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHCCCCC
GRKSILPGISSYETIMANHALVLNPNKNGINPNCSCGNLENNPMHLDMMEACDMIKPSFL
CCHHHCCCCHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCHHHH
LNVIMDSKGNITEAVAGNYAKAFERGCELLQENNGLKIKKLKDTVIVSAGGFPKDINLYQ
HHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCCCCHHHH
SSKALSNAKEAVKKGGKIILFTQCIEGIGNKEVEEIINNFNNNEEREEELRRKFTVSKFA
HHHHHHHHHHHHHCCCCEEEEHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AYLICSIAKEYELILISDIKEELVSKAGIRVFEDESIINEILKENEEIYLMPDGSSLLPK
HHHHHHHHHCCCEEEHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCEEEEEECCCCCCCC
YSNIQK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA