| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757351
Identifier: 170757351
GI number: 170757351
Start: 285213
End: 285716
Strand: Direct
Name: 170757351
Synonym: CLD_0539
Alternate gene names: NA
Gene position: 285213-285716 (Clockwise)
Preceding gene: 170755344
Following gene: 170755817
Centisome position: 7.21
GC content: 29.17
Gene sequence:
>504_bases ATGAGTAAATTTAATGATACAATTACTGAGCTAAACAATAGAATATATAATCCGAATAATCTTGTAATCAAGAATATACA TGAAGAAAAACAAAACTCAGAATATGCTGGTGGTATATTCCAATTGAACCATAGAACAATCAGATTCAGAATGTCTAAAG TCACTCCTAATAAAGTTGGACAATTTGTTTCATTTTGGAAGAAAGATGAAAATATGCAAAATCAAGCATTTTCCTATGAA TCAGCACCTGACTTATTAGTTATCACTTGTACTACGGATAATAAACTCGGGCAATTCATTTTTCCTAAAAAAATACTCTT AGAAAAAAAAATACTGAGAACTTATTTACAAAAAGGCAAGATGGCAATGAGAGTTTACCCTATTTGGGATACTCCAAGCA GTAATCAAGCTATAAAGACTCAAAAGTGGCAACTTCCATATTTTATAGATTTAAGTGATTCAGAAAAATTTCCTATAGAT AAATTAACAAACCTATATTCATAG
Upstream 100 bases:
>100_bases AAGAAATATGAGTAATAAAAAATACTTAAGATTTTTCATTGATTTGGAACTAGAGTTCGATTACTATTAAAGTAGTATAA AAAGACTAGGAGTATTTCTT
Downstream 100 bases:
>100_bases TCTTTATAAATAGATTTGAGTATATATTGCACAATTTAATTCATAAAGGAGTATATTTAGAGATTTACAAAGAGATATGG ATATTATATTTGAAACAGAT
Product: MepB family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSKFNDTITELNNRIYNPNNLVIKNIHEEKQNSEYAGGIFQLNHRTIRFRMSKVTPNKVGQFVSFWKKDENMQNQAFSYE SAPDLLVITCTTDNKLGQFIFPKKILLEKKILRTYLQKGKMAMRVYPIWDTPSSNQAIKTQKWQLPYFIDLSDSEKFPID KLTNLYS
Sequences:
>Translated_167_residues MSKFNDTITELNNRIYNPNNLVIKNIHEEKQNSEYAGGIFQLNHRTIRFRMSKVTPNKVGQFVSFWKKDENMQNQAFSYE SAPDLLVITCTTDNKLGQFIFPKKILLEKKILRTYLQKGKMAMRVYPIWDTPSSNQAIKTQKWQLPYFIDLSDSEKFPID KLTNLYS >Mature_166_residues SKFNDTITELNNRIYNPNNLVIKNIHEEKQNSEYAGGIFQLNHRTIRFRMSKVTPNKVGQFVSFWKKDENMQNQAFSYES APDLLVITCTTDNKLGQFIFPKKILLEKKILRTYLQKGKMAMRVYPIWDTPSSNQAIKTQKWQLPYFIDLSDSEKFPIDK LTNLYS
Specific function: Unknown
COG id: COG4815
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19666; Mature: 19535
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFNDTITELNNRIYNPNNLVIKNIHEEKQNSEYAGGIFQLNHRTIRFRMSKVTPNKVG CCCCHHHHHHHHCCEECCCCEEEECCHHHHCCCCCCCCEEEECCEEEEEEEECCCHHHHH QFVSFWKKDENMQNQAFSYESAPDLLVITCTTDNKLGQFIFPKKILLEKKILRTYLQKGK HHHHHHHCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC MAMRVYPIWDTPSSNQAIKTQKWQLPYFIDLSDSEKFPIDKLTNLYS EEEEEEEEECCCCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHCC >Mature Secondary Structure SKFNDTITELNNRIYNPNNLVIKNIHEEKQNSEYAGGIFQLNHRTIRFRMSKVTPNKVG CCCHHHHHHHHCCEECCCCEEEECCHHHHCCCCCCCCEEEECCEEEEEEEECCCHHHHH QFVSFWKKDENMQNQAFSYESAPDLLVITCTTDNKLGQFIFPKKILLEKKILRTYLQKGK HHHHHHHCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC MAMRVYPIWDTPSSNQAIKTQKWQLPYFIDLSDSEKFPIDKLTNLYS EEEEEEEEECCCCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA