| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is cheR
Identifier: 170755806
GI number: 170755806
Start: 2918499
End: 2919269
Strand: Reverse
Name: cheR
Synonym: CLD_1825
Alternate gene names: 170755806
Gene position: 2919269-2918499 (Counterclockwise)
Preceding gene: 170754935
Following gene: 170755986
Centisome position: 73.75
GC content: 25.55
Gene sequence:
>771_bases ATGGATTTAGAATATTTCGAGGAGTGGGTATTAAAGGATTTTGGAATAAATTTAAAAGCATATAAACAAAATCAGCTTCA AAGAAGAATATTAAGTTTGATGTCAAGGGTTGGAGTAAATTCAGTAGAAGAATATATTAACTTATTAAAGAAAGATAAGG ATCAAAGGATAAAGTTTCTAGATTTTATTACTATAAATGTATCTGAATTTTTTAGAAATCCAGAAATATTTGATGAATTG GAGAAAAAAATAAAATCAGAACTTTTAAATAATACATCAGGATCTCTAAAGATTTGGAGCGCAGCCTGTTCAATAGGGGC AGAACCCTATTCTTTATTTATAATAATGGATGAACTATCACCTAGTAAAAAATATAAAATAATAGCTACAGATTTAGATA TGACTATATTGCAAAGAGCTAAAGAAGGTATATACACACAGGCGGAAATTAAAAATGTAAAAAAAGAAAGACTAGAAAAA TACTTCACAAAAGAAGAGGAAAAATATAAAATAAAATCATCTATAAAAAATGTGGTTACATTTAAAAAACATGATTTAAT ACTAGATAACTATGAAAAAGATTTTGATCTTATAGTTTGCAGAAATGTGGTTATATACTTTAATCAAGATATAAAAGACA GTATATATAAGAAATTTTCAGAGTCACTGAAAAAAGGAGGCTTACTTTTTGTAGGAGCTACAGAAAGCATTTATAATTAT AAAGATTATGGTTTTGAGAAGGTGTCTACATTTATATATAGAAAAATATAA
Upstream 100 bases:
>100_bases TGCCAAAAGCAACTTACGAAACAGGAAAGGTGGATTTTGTAGTACCACTTTATAATGTTACAGATACAATACTGAAAAAT ATTTAATTTTGGAGGTAATT
Downstream 100 bases:
>100_bases GGGGGAAGTAACATGGATACATCACAATACATGTCAATGTTCCTAGAAGAATCTATGGACAATTTACAAACATTAAATGA CTCCTTACTTCAATTAGAAC
Product: chemotaxis protein methyltransferase CheR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MDLEYFEEWVLKDFGINLKAYKQNQLQRRILSLMSRVGVNSVEEYINLLKKDKDQRIKFLDFITINVSEFFRNPEIFDEL EKKIKSELLNNTSGSLKIWSAACSIGAEPYSLFIIMDELSPSKKYKIIATDLDMTILQRAKEGIYTQAEIKNVKKERLEK YFTKEEEKYKIKSSIKNVVTFKKHDLILDNYEKDFDLIVCRNVVIYFNQDIKDSIYKKFSESLKKGGLLFVGATESIYNY KDYGFEKVSTFIYRKI
Sequences:
>Translated_256_residues MDLEYFEEWVLKDFGINLKAYKQNQLQRRILSLMSRVGVNSVEEYINLLKKDKDQRIKFLDFITINVSEFFRNPEIFDEL EKKIKSELLNNTSGSLKIWSAACSIGAEPYSLFIIMDELSPSKKYKIIATDLDMTILQRAKEGIYTQAEIKNVKKERLEK YFTKEEEKYKIKSSIKNVVTFKKHDLILDNYEKDFDLIVCRNVVIYFNQDIKDSIYKKFSESLKKGGLLFVGATESIYNY KDYGFEKVSTFIYRKI >Mature_256_residues MDLEYFEEWVLKDFGINLKAYKQNQLQRRILSLMSRVGVNSVEEYINLLKKDKDQRIKFLDFITINVSEFFRNPEIFDEL EKKIKSELLNNTSGSLKIWSAACSIGAEPYSLFIIMDELSPSKKYKIIATDLDMTILQRAKEGIYTQAEIKNVKKERLEK YFTKEEEKYKIKSSIKNVVTFKKHDLILDNYEKDFDLIVCRNVVIYFNQDIKDSIYKKFSESLKKGGLLFVGATESIYNY KDYGFEKVSTFIYRKI
Specific function: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP [H]
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheR-type methyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788193, Length=232, Percent_Identity=31.8965517241379, Blast_Score=137, Evalue=8e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022642 - InterPro: IPR000780 - InterPro: IPR022641 [H]
Pfam domain/function: PF01739 CheR; PF03705 CheR_N [H]
EC number: =2.1.1.80 [H]
Molecular weight: Translated: 30256; Mature: 30256
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS50123 CHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLEYFEEWVLKDFGINLKAYKQNQLQRRILSLMSRVGVNSVEEYINLLKKDKDQRIKFL CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEH DFITINVSEFFRNPEIFDELEKKIKSELLNNTSGSLKIWSAACSIGAEPYSLFIIMDELS HEEEEEHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCEEEEEEEECCC PSKKYKIIATDLDMTILQRAKEGIYTQAEIKNVKKERLEKYFTKEEEKYKIKSSIKNVVT CCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FKKHDLILDNYEKDFDLIVCRNVVIYFNQDIKDSIYKKFSESLKKGGLLFVGATESIYNY HHHCCCEECCCCCCHHHEEECCEEEEECCCHHHHHHHHHHHHHHHCCEEEEECCHHHHCH KDYGFEKVSTFIYRKI HHCCHHHHHHHHHHCC >Mature Secondary Structure MDLEYFEEWVLKDFGINLKAYKQNQLQRRILSLMSRVGVNSVEEYINLLKKDKDQRIKFL CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEH DFITINVSEFFRNPEIFDELEKKIKSELLNNTSGSLKIWSAACSIGAEPYSLFIIMDELS HEEEEEHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCEEEEEEEECCC PSKKYKIIATDLDMTILQRAKEGIYTQAEIKNVKKERLEKYFTKEEEKYKIKSSIKNVVT CCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FKKHDLILDNYEKDFDLIVCRNVVIYFNQDIKDSIYKKFSESLKKGGLLFVGATESIYNY HHHCCCEECCCCCCHHHEEECCEEEEECCCHHHHHHHHHHHHHHHCCEEEEECCHHHHCH KDYGFEKVSTFIYRKI HHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]