| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is cheB
Identifier: 170754935
GI number: 170754935
Start: 2919284
End: 2920348
Strand: Reverse
Name: cheB
Synonym: CLD_1824
Alternate gene names: 170754935
Gene position: 2920348-2919284 (Counterclockwise)
Preceding gene: 170757607
Following gene: 170755806
Centisome position: 73.78
GC content: 30.89
Gene sequence:
>1065_bases TTGAATAAAATTAAAGTTTTAGTAGTAGATGACTCGGCTTTAATGAGAAAAATAGTATCAGATATGATAAATGAAGAAAA TGATTTAGAAGTAATAGATACAGCTAGGAATGGAGAAGATCTTTTAGAAAAGTTAAAGAGGATAAAGCCAAATATAATAA CATTAGATGTGGAAATGCCTAAAATGGATGGAATAGAAGCTTTAATAAATATTAAAAGGATTTACAAAGATATACCGGTT ATTATGCTTAGTAGTTTATCTAAAAAAGGTGCAGGATTAACTATGGATTGTCTTCAAAAGGGAGCCTTTGATTTTGTACC TAAGCCATCAGGGGCTATATCTTTAGATATAAATAAAGTAAAAGAAGAATTAGTAGAAAAAATAAGAGCTGCTACTAATG CTATAAAAAATAATTACACTTCAGATATTTTAAAAACAGACGAAAAAATTAATGTTAAAAAAGTGGAAGAAAAAAGATAT CCTATAAAAAATACTATTTCTTCAAAAAAAATAGAAGCTGTAGTTATAGGAGCTTCAACAGGAGGCCCTAAAGCATTATA TTCAGTAATAACAGCTTTTCCAGAAAAAATAGATGTGCCAGTATTTGTAGTTCAACATATGCCAAAAGGATTTACCAAAG CTTTTTCAGAAAGACTAAATGCTAATAGTAAATTAAAAGTTGTAGAAGGGCAAGATGGACAAACTATAGAGAAAGATACT GTTTATGTAGCTCCAGGAGGCTTTCATATGGAAGTAGGAAAGGACAGAAAAATACATCTAAACATAGAACCAACCCTATG GGGAGTGAGACCAGCTGTAGATAAGTTATTTAAATCAGCATCTGAAGTTTATGGCAGCAACTTAATAAGTGTTGTATTAA CTGGTATGGGAAGAGATGGCGCAGATGGTACAGCCTATATAAAAGATAGAGGAGGCATAACCATATCAGAAGATAAATCT ACCTGTACTATATACGGTATGCCAAAAGCAACTTACGAAACAGGAAAGGTGGATTTTGTAGTACCACTTTATAATGTTAC AGATACAATACTGAAAAATATTTAA
Upstream 100 bases:
>100_bases GGAAGAACTATGATATTTGATACCTCCACAGGAAAAGTATATATAAAGACTGTAGGCTTAGGAACTAAAGAAATATAGAT AAGTTATTGGAGTGATTCAT
Downstream 100 bases:
>100_bases TTTTGGAGGTAATTATGGATTTAGAATATTTCGAGGAGTGGGTATTAAAGGATTTTGGAATAAATTTAAAAGCATATAAA CAAAATCAGCTTCAAAGAAG
Product: protein-glutamate methylesterase CheB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MNKIKVLVVDDSALMRKIVSDMINEENDLEVIDTARNGEDLLEKLKRIKPNIITLDVEMPKMDGIEALINIKRIYKDIPV IMLSSLSKKGAGLTMDCLQKGAFDFVPKPSGAISLDINKVKEELVEKIRAATNAIKNNYTSDILKTDEKINVKKVEEKRY PIKNTISSKKIEAVVIGASTGGPKALYSVITAFPEKIDVPVFVVQHMPKGFTKAFSERLNANSKLKVVEGQDGQTIEKDT VYVAPGGFHMEVGKDRKIHLNIEPTLWGVRPAVDKLFKSASEVYGSNLISVVLTGMGRDGADGTAYIKDRGGITISEDKS TCTIYGMPKATYETGKVDFVVPLYNVTDTILKNI
Sequences:
>Translated_354_residues MNKIKVLVVDDSALMRKIVSDMINEENDLEVIDTARNGEDLLEKLKRIKPNIITLDVEMPKMDGIEALINIKRIYKDIPV IMLSSLSKKGAGLTMDCLQKGAFDFVPKPSGAISLDINKVKEELVEKIRAATNAIKNNYTSDILKTDEKINVKKVEEKRY PIKNTISSKKIEAVVIGASTGGPKALYSVITAFPEKIDVPVFVVQHMPKGFTKAFSERLNANSKLKVVEGQDGQTIEKDT VYVAPGGFHMEVGKDRKIHLNIEPTLWGVRPAVDKLFKSASEVYGSNLISVVLTGMGRDGADGTAYIKDRGGITISEDKS TCTIYGMPKATYETGKVDFVVPLYNVTDTILKNI >Mature_354_residues MNKIKVLVVDDSALMRKIVSDMINEENDLEVIDTARNGEDLLEKLKRIKPNIITLDVEMPKMDGIEALINIKRIYKDIPV IMLSSLSKKGAGLTMDCLQKGAFDFVPKPSGAISLDINKVKEELVEKIRAATNAIKNNYTSDILKTDEKINVKKVEEKRY PIKNTISSKKIEAVVIGASTGGPKALYSVITAFPEKIDVPVFVVQHMPKGFTKAFSERLNANSKLKVVEGQDGQTIEKDT VYVAPGGFHMEVGKDRKIHLNIEPTLWGVRPAVDKLFKSASEVYGSNLISVVLTGMGRDGADGTAYIKDRGGITISEDKS TCTIYGMPKATYETGKVDFVVPLYNVTDTILKNI
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=358, Percent_Identity=37.1508379888268, Blast_Score=235, Evalue=3e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 39011; Mature: 39011
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIKVLVVDDSALMRKIVSDMINEENDLEVIDTARNGEDLLEKLKRIKPNIITLDVEMP CCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEECC KMDGIEALINIKRIYKDIPVIMLSSLSKKGAGLTMDCLQKGAFDFVPKPSGAISLDINKV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEHHHH KEELVEKIRAATNAIKNNYTSDILKTDEKINVKKVEEKRYPIKNTISSKKIEAVVIGAST HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHCCCHHHCCCCCCEEEEEEECCC GGPKALYSVITAFPEKIDVPVFVVQHMPKGFTKAFSERLNANSKLKVVEGQDGQTIEKDT CCHHHHHHHHHHCHHHCCCCEEEEHHCCCHHHHHHHHHHCCCCEEEEEECCCCCEEECCE VYVAPGGFHMEVGKDRKIHLNIEPTLWGVRPAVDKLFKSASEVYGSNLISVVLTGMGRDG EEECCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHEEHHHCCCCCCC ADGTAYIKDRGGITISEDKSTCTIYGMPKATYETGKVDFVVPLYNVTDTILKNI CCCEEEEECCCCEEEECCCCEEEEEECCCCCCCCCCEEEEEECHHHHHHHHHCC >Mature Secondary Structure MNKIKVLVVDDSALMRKIVSDMINEENDLEVIDTARNGEDLLEKLKRIKPNIITLDVEMP CCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEECC KMDGIEALINIKRIYKDIPVIMLSSLSKKGAGLTMDCLQKGAFDFVPKPSGAISLDINKV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEHHHH KEELVEKIRAATNAIKNNYTSDILKTDEKINVKKVEEKRYPIKNTISSKKIEAVVIGAST HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHCCCHHHCCCCCCEEEEEEECCC GGPKALYSVITAFPEKIDVPVFVVQHMPKGFTKAFSERLNANSKLKVVEGQDGQTIEKDT CCHHHHHHHHHHCHHHCCCCEEEEHHCCCHHHHHHHHHHCCCCEEEEEECCCCCEEECCE VYVAPGGFHMEVGKDRKIHLNIEPTLWGVRPAVDKLFKSASEVYGSNLISVVLTGMGRDG EEECCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHEEHHHCCCCCCC ADGTAYIKDRGGITISEDKSTCTIYGMPKATYETGKVDFVVPLYNVTDTILKNI CCCEEEEECCCCEEEECCCCEEEEEECCCCCCCCCCEEEEEECHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]